Query= MSMg01no476_j24.b1 MSMg01no476_j24.b1 CHROMAT_FILE:
MSMg01no476_j24.b1 PHD_FILE: MSMg01no476_j24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:47 2005
(474 letters)
>mm_chr2_152872220_152873092
Length = 873
Score = 862 bits (446), Expect = 0.0
Identities = 464/470 (98%), Gaps = 1/470 (0%)
Strand = Plus / Plus
Query: 5 gaattctgcccacttatctgaccctgctgcccactcacggaggtcacagggtcctgaggg 64
|||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattctgcccactta-ctgaccctgctgcccactcacggaggtcacagggttctgaggg 263
Query: 65 agccatgaacccagagtaggtggattccaacactaactgttggcctctctgttttcgcag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agccatgaacccagagtaggtggattccaacactaactgttggcctctctgttttcgcag 323
Query: 125 accaggcctgttttgctcccagccccacctgtttatgcttattggttcctcggcttcctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accaggcctgttttgctcccagccccacctgtttatgcttattggttcctcggcttcctc 383
Query: 185 ttctagaccaagcttcctctcttagcatgcatgagacagtgaactggaggctggcaagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttctagaccaagcttcctctcttagcatgcatgagacagtgaactggaggctggcaagat 443
Query: 245 ggctcagaaggcaaagacacttactaccaggcctgacttcttgattttggtccctgggtc 304
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 444 ggctcagaaggcaaagacacttactaccaggcctgaccacttgattttggtccctgggtc 503
Query: 305 tcacatgtgagaaggaaagagctgactcccacaggatgtcccccaaccttcacacatgac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcacatgtgagaaggaaagagctgactcccacaggatgtcccccaaccttcacacatgac 563
Query: 365 acacacacacatacacacacacacacacacaccaacctccccacatggaatacacatgcc 424
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 acacacacacacacacacacacacacacacaccaacctccccacatggaatacacatgcc 623
Query: 425 tacacacacacataccaacctccacacatggcacacacatgcctacacac 474
|||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tacatacacacataccaacctccacacatggcacacacatgcctacacac 673
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 873
Length adjustment: 10
Effective length of query: 464
Effective length of database: 863
Effective search space: 400432
Effective search space used: 400432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no476_j24.g1 MSMg01no476_j24.g1 CHROMAT_FILE:
MSMg01no476_j24.g1 PHD_FILE: MSMg01no476_j24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:47 2005
(170 letters)
>mm_chr2_153046692_153047261
Length = 570
Score = 306 bits (158), Expect = 6e-88
Identities = 167/170 (98%)
Strand = Plus / Minus
Query: 1 tgtgaggccctggttccatcccagcaatgcaaataaataaaactaacatgtgagtctgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 tgtgaggccctggttccatcccagcaatgcaaataaataaaactaacatgtgagtctgga 311
Query: 61 gaagggactttctggcagggtgaactgtaagtacagacacgggcatattgaaaatgcagc 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 310 gaagggactttctggcagggtgaactgtgagtacagacacgggcatattgaaaatgcagt 251
Query: 121 gtgttgaacacatgatgtctgcccgagtagatgggtagggctgggtgggg 170
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 250 gtgttgaacacatgatgtctacccgagtagatgggtagggctgggtgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
