Query= MSMg01no477_b08.b1 MSMg01no477_b08.b1 CHROMAT_FILE:
MSMg01no477_b08.b1 PHD_FILE: MSMg01no477_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:25 2005
(674 letters)
>mm_chr2_144281213_144282287
Length = 1075
Score = 1127 bits (583), Expect = 0.0
Identities = 649/671 (96%), Gaps = 1/671 (0%)
Strand = Plus / Minus
Query: 5 gaattctctacatatattttgttattttcctcgttgttcccaattgctgctgttaacaac 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gaattctctacatacattttgttattttcctcgttgttcccaattgctgctgttaacaac 816
Query: 65 acacacgacaacagcaacaactcattagttgaaaccccaaaagattcttcatcaaaagga 124
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 815 acacacgacaacagcaacaactcattagttgaaaccccaaatgattcttcatcaaaagaa 756
Query: 125 gattggaatgagcaacagaagtgtagaattcctgtgagaagcacaatgaacccacaggga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 gattggaatgagcaacagaagtgtagaattcctgtgagaagcacaatgaacccacaggga 696
Query: 185 gtatgaaatgaaggctggctggctggtacgtgctcaaactgttgttcaggaaaagcccaa 244
| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 695 gcatgaaatgaaggctggctggctggtacgtgctcaaactgttgttcaggaaaaacccaa 636
Query: 245 agaaaggacggcaagcggtccttatttcagtcacagcagtccttgtttgtcaaataatta 304
||||||||| ||||| || |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 635 agaaaggacagcaagtggcccttatttcagtcacagcagtccttgcttgtcaaataatta 576
Query: 305 agcaaatgtgtccccttctgctgtatctgttaagagtcaggaactctgaacggtctctgg 364
|||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||
Sbjct: 575 agcaaatgtgtccccttctgctatatctgttaagagtcaggaactctgaacagtccctgg 516
Query: 365 aagccagagtttcgagggatctaattaagtaa-tttttttctcacctccaaacagagtcc 423
|||||||||||| | ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 515 aagccagagttttgcgggatctaattcagtaaatttttttctcacctccaaacagagtcc 456
Query: 424 tctgtaactaatcttatagccattctatggatccagagtgccaggtttcaattcttaatg 483
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tctgtaactaatctcatagccattctatggatccagagtgccaggtttcaattcttaatg 396
Query: 484 aaaacagtctcctggtttatacaacaacacaaacattccagaaatccttttcagctctgt 543
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 395 aaaacagtctcctggtttatagaacaacacgaacattccagaaatccttttcagctctgt 336
Query: 544 gtgaggtgaacacaaccctttcttaagtcctagtagcttttgctttacaataaaagcata 603
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 335 gtgaggtgaacacaaccctttcttaagtcctagtagcttttgctttataataagagcata 276
Query: 604 agaatacttttcacaaaggccataattctgatatcaaattcactgcattaaatggtttta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 275 agaatacttttcacaaaggccataattctgatatcaaattcactgcattaaatggttcta 216
Query: 664 ttaatgggaaa 674
|||||||||||
Sbjct: 215 ttaatgggaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1075
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1065
Effective search space: 707160
Effective search space used: 707160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_b08.g1 MSMg01no477_b08.g1 CHROMAT_FILE:
MSMg01no477_b08.g1 PHD_FILE: MSMg01no477_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:25 2005
(399 letters)
>mm_chr2_144100390_144101184
Length = 795
Score = 675 bits (349), Expect = 0.0
Identities = 385/399 (96%), Gaps = 4/399 (1%)
Strand = Plus / Plus
Query: 1 ggctgctggaggagccgccatcagtatcttgctgagttatttgaaagcacaaaggccact 60
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 ggctgctggaggagccgctgtcagtatcttgctgagttatttgaaagcaccaaggccact 260
Query: 61 ccctagcctaacactgctctctccctctccttcaccagcgatcaagtgactgtgttgcac 120
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 261 ccctagcctaacactgctct----ctctccttcagcagcgatcaagtgactgtgttgcac 316
Query: 121 tttgattgcgtatgtttatgtttcctgttcttaacataaaagaatgtaaggaggcctcag 180
||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |
Sbjct: 317 tttgattgcgtatgtttatgtttcctgttcttaacgtaaaagaatgtaaggaagcctcgg 376
Query: 181 gagatggctttgtagttggttaagcgagttcctcacagacattgtaattgcagcctgggc 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 377 gagatggctttgtagttggttaagcgagttcctcacagacattgttattgcagcctgagc 436
Query: 241 agggccccagtaaggcctccattctcaggaatgaactctccctccagcttgggtggacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 agggccccagtaaggcctccattctcaggaatgaactctccctccagcttgggtggacac 496
Query: 301 ctagcatgacaacctaccccaaaacactaagagttgagccagttgaactggtcagtcagc 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 caagcatgacaacctaccccaaaacactaagagttgagccagttgaactggtcagtcagc 556
Query: 361 ctgcctcaaagaccactcctcaggaaggtatagtcacct 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctgcctcaaagaccactcctcaggaaggtatagtcacct 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 795
Length adjustment: 9
Effective length of query: 390
Effective length of database: 786
Effective search space: 306540
Effective search space used: 306540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
