Query= MSMg01no477_c12.b1 MSMg01no477_c12.b1 CHROMAT_FILE:
MSMg01no477_c12.b1 PHD_FILE: MSMg01no477_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:31 2005
(686 letters)
>mm_chr2_135886327_135887413
Length = 1087
Score = 1295 bits (670), Expect = 0.0
Identities = 679/682 (99%), Gaps = 1/682 (0%)
Strand = Plus / Minus
Query: 6 gaattctcaaatgctttgggagaaa-tactcaaggatggtggactctcagttagaggtga 64
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 887 gaattctcaaatgctttgggagaaattactcaaggatggtggactctcagttagaggtga 828
Query: 65 gagcaagctttgtggaggtaaagcaggatagcttgggaaatggtaggtcagtcacatgat 124
||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct: 827 gagcaagctttgtggaggtaaagcaggatagcttgggaaatggtaggtccgtcagatgat 768
Query: 125 cctccaatctgaacagttaaataattcattgcattcgctcggtaatccccaaccccatgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 cctccaatctgaacagttaaataattcattgcattcgctcggtaatccccaaccccatgg 708
Query: 185 aaagtacaaataaagaaattagaatctgcctatgagaatcagaatatcaaattgccttta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aaagtacaaataaagaaattagaatctgcctatgagaatcagaatatcaaattgccttta 648
Query: 245 aataatttctcctatacaagtgagtaagagaataaagaggcaaagggttgggacagggat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aataatttctcctatacaagtgagtaagagaataaagaggcaaagggttgggacagggat 588
Query: 305 gggtatttcagaaaccttataacgtctacatcttgtgaaaactgctgagaagaaacaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gggtatttcagaaaccttataacgtctacatcttgtgaaaactgctgagaagaaacaaag 528
Query: 365 gtaacaccatcccgggagggaggccagtaagcccctcttttcagccctctttaaatcctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gtaacaccatcccgggagggaggccagtaagcccctcttttcagccctctttaaatcctc 468
Query: 425 ctttccctttcctaccgccagcctaacctaccttcactgaagacaaagtcagagatgata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ctttccctttcctaccgccagcctaacctaccttcactgaagacaaagtcagagatgata 408
Query: 485 tcaaagggctggatgtgcactgcggacaggatcatggtgacagtcttctgagggtcactg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tcaaagggctggatgtgcactgcggacaggatcatggtgacagtcttctgagggtcactg 348
Query: 545 gaggccagagaaatggtctgctgagcctgacactcataggacatcccagctggggtgacc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gaggccagagaaatggtctgctgagcctgacactcataggacatcccagctggggtgacc 288
Query: 605 aaggcagagaggtgatgagagctggcgatgtacttattaactgcgggagaagcaaggcag 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 aaggcagagaggtgatgagagctggcgatgtacttattaactgcgggagaagcaaggcag 228
Query: 665 cagttaggatggatgcatactc 686
||||||||||||||||||||||
Sbjct: 227 cagttaggatggatgcatactc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1087
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1077
Effective search space: 728052
Effective search space used: 728052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_c12.g1 MSMg01no477_c12.g1 CHROMAT_FILE:
MSMg01no477_c12.g1 PHD_FILE: MSMg01no477_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:31 2005
(291 letters)
>mm_chr2_135704018_135704708
Length = 691
Score = 491 bits (254), Expect = e-143
Identities = 275/282 (97%)
Strand = Plus / Plus
Query: 10 actgtaagatgaatcaaagcaatatcccaccaccagaagctagattgcctggcagttttc 69
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 210 actgtaagatgaatcaaagcaatatcctaccaccagaagctagattgcctggcagttttc 269
Query: 70 ttctagcctttttattttgtttcattttgtgttttatttctcccttgtagttgagatcat 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ttctagcctttttattttgtttcattttgtgttttatttctcccttgtagttgagatcat 329
Query: 130 ggaatgcatttttaaaacccaagctttccataattcatctcttccctgcttccacaattt 189
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 330 ggaatacatttttaaaacccaagctttccataattcatctcttctctgcttccacaattt 389
Query: 190 catctcccactagtttttctcatgtaccctccatggtaatcatagccaatctctcgtgga 249
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 390 tatctcccactagtttttctcatgcaccctccatggtaatcatagccaatctctcgtgga 449
Query: 250 ctcttttctcctcctgaggtacactttttcccagggtttaat 291
|||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 450 ctcttttctcctcctgaggtacacttgttcccggggtttaat 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
