GCGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCGATCCGCGGAAT
TCTTTGTTTAGCTCTGAGCCCCATTTTTAATGGGGTTATTTGATTTTCTT
GAGTTCTTTATATATATTAGATATTAGTCCCCTATCTGATTTATGATAGG
TAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTG
TTTTTTGCCTTACAGAAGCTTTGCAGTTTTATAAGGTCCAATTTGTCAAT
TCTTGATCTTACAGCACAAGCCATTGCTGTTCTATTCAGGAATTTTTCCC
CTGTGCCCATATCTTTGAGGCTTTTCCCCACTTTCTCCTCTTTAAGTTTA
ACTGTCTCTGGTTTTATGGATCAAGTTCCTTGATCCACTTAGATTTGACC
TTAGTACAGGAGATAGGAATGGATCAATTTGCAGTCTTCTACATGATAAC
TACCAGTTGTTCCAGCACCATTTGTTGAGAATGCTGTCTTTTTTTCCACT
GGATGGTTTTAGCTCCCTTGTCGAAGATCAGGTGACCATAGGTGTGTGGG
TTCATTTCTAGGTCTTCAATTCTATTACATTGGTCTACTTGTCTGTCACT
ATACCAATACCATGCAGTTGTTTTTTTTTTTTTTTTTTTTTTTTATCACA
ATTGCTCTGTAGTACAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGT
TCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTAGGTN

NCGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCATTGTGTCATAGAGGTGATTTCCA
TGTTTTCTCAGATACCAGATAATGCTGTAAGACTCTGAGGGACTAATGTG
GAAAACCTCACTAGGGAAGCTCATGGTTTTATCAATGCTGTGGAACTTAT
CAAGACTACTATCATCAGTGATGTAGCAGGTATACTGTGAGAGGTGACTG
AGGAGATGGCTACAGTCTTTTATAAAGTGCTTATAATAGTGTTAGCATGA
TCACATGGCACATTTCTAACAAAAAGGTCACTACACCGTGATGTGAGAAA
CTCCAGCTCTGCGCTTGTGCTTGCCAGTTACTATAAAATCCTGGGAAAGA
CTAAGCCATCATCCTGGGCTCCAATTTCCCTAGCTGTGAAAATATAAGGT
GATCAATAAGTGATCATTTAAATGATCATGAAAACTCCTATCTGACCCTG
ATTTGTCACAGCAATCCTTTCATTAGCAGTAAAACCTAGGCTGGAGGGAT
TGTATGTATGTATCTAGATGCAAACATGTTTAGACATCAGAACAAAGACA
AGATAAACCAACTGTAAGAATAAAGGACACAAGGAGAATTCCCTAGCTAT
CTTCCTTCTCATTTTGTATAAGCTGACTTTAATTCAGGGGTAAAGTGTTT
TTCTTTTGTCTGCAATGGTTTTTCATTGAGCAATCGGCAGAGCTCTCTGC
GCAAATATCACACCCACAGGGATGC

Query= MSMg01no477_i22.g1 MSMg01no477_i22.g1 CHROMAT_FILE:
MSMg01no477_i22.g1 PHD_FILE: MSMg01no477_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:02 2005
         (638 letters)



>mm_chr2_140858084_140859121
          Length = 1038

 Score = 1187 bits (614), Expect = 0.0
 Identities = 632/638 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcattgtgtcatagaggtgatttccatgttttctcagataccagataatgctgtaagact 60
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 tcattatgtcatagaggtgatttccatgttttctcagataccagataatgctgtaagact 779

                                                                       
Query: 61  ctgagggactaatgtggaaaacctcactagggaagctcatggttttatcaatgctgtgga 120
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 778 ctgagggactaatgtggaaaacctcaccagggaagctcatggttttatcaatgctgtgga 719

                                                                       
Query: 121 acttatcaagactactatcatcagtgatgtagcaggtatactgtgagaggtgactgagga 180
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 acttatcaagactagtatcatcagtgatgtagcaggtatactgtgagaggtgactgagga 659

                                                                       
Query: 181 gatggctacagtcttttataaagtgcttataatagtgttagcatgatcacatggcacatt 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 658 gatggctacagtcttttataaagtgcttataatagtgttagtatgatcacatggcacatt 599

                                                                       
Query: 241 tctaacaaaaaggtcactacaccgtgatgtgagaaactccagctctgcgcttgtgcttgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tctaacaaaaaggtcactacaccgtgatgtgagaaactccagctctgcgcttgtgcttgc 539

                                                                       
Query: 301 cagttactataaaatcctgggaaagactaagccatcatcctgggctccaatttccctagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cagttactataaaatcctgggaaagactaagccatcatcctgggctccaatttccctagc 479

                                                                       
Query: 361 tgtgaaaatataaggtgatcaataagtgatcatttaaatgatcatgaaaactcctatctg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tgtgaaaatataaggtgatcaataagtgatcatttaaatgatcatgaaaactcctatctg 419

                                                                       
Query: 421 accctgatttgtcacagcaatcctttcattagcagtaaaacctaggctggagggattgta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 accctgatttgtcacagcaatcctttcattagcagtaaaacctaggctggagggattgta 359

                                                                       
Query: 481 tgtatgtatctagatgcaaacatgtttagacatcagaacaaagacaagataaaccaactg 540
           ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 358 tgtgtgtatctagatgcaaacaagtttagacatcagaacaaagacaagataaaccaactg 299

                                                                       
Query: 541 taagaataaaggacacaaggagaattccctagctatcttccttctcattttgtataagct 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 taagaataaaggacacaaggagaattccctagctatcttccttctcattttgtataagct 239

                                                 
Query: 601 gactttaattcaggggtaaagtgtttttcttttgtctg 638
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 238 gactttaattcaggggtaaagtgtttttcttttgtctg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)