TTGCGGCGCTATACGACTCGTAGAGGGTTCGGATCCGCGGAATTCTGTGG
GCTTTCCAGAACATGAGTGGGGCTGAGTCCTTCGGCCAGCGACTTTGGGG
TTGCAGCTGGCAGTGGTGATCAAAGGTGCATCCGTGAGAGATGACAAGGA
CTCAGCACTCACCCAGCTACACTCTACTGCAGAAGTCTGGGGGCTGGCAG
GTTCAATCTCTAGCTCCACATTTTTAATTAAAAGAAAAATCTTTAGTGCA
TAAAGTATCATTACTCTTAAGCAATATTAAAGGCCAGCAGATGCTGAAGT
GTTGAAGGAAAATCACCATCAACCTTGACTTTTTGTTCAACAAAACAATT
TCAAGTGAGGGCCTGTGAACTTTTTCTTAAAGGGCTACATAACTTTAATT
TTTTTCAAATCCTATTTTTAGTGATGGTTCTTAAATGCTTTAACTTCCTT
TTAGCCCACTACCCATGAGAGGTAGTGGAAAAGAAAGGATATGAAGGTGG
CAGGGAGTGGGCCTGTTTAGAAAGTCCTTTTGGGGCAACTCCCATCTGTG
TTGTCTGAAAATCAACAGCCCAGTTCACAGGTTAGCAAGCAAGTGCCAGC
TTGATCCAACTTGGTAACACTTCCCAGAAACCACCAGCAGGGCAATTTCA
GTTCCTGGGTTGCAAACATCCGGGGAATTTGACACTACCAGAGAAAGGCC
CAGGGCCCTAACTT

NCCCGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAAAAAAGGGAG
GTGACACTATAGAATTCCCCGAGGAATTCCCATTCTGCGGCATCAAAAAG
GTGTTTCTGAGAAACTTGCCTGGAAAATGGGTACATTGTTCTCTCCTCAG
TTTCCCAGAACATGATTGAACCAAGTTAAGGAGGTTTTACAAGATTTTTC
CCTTCCTCCCTCTCCTCTTTCTTTCGGACTTGGAGTGGAAAGTAGGGCTT
CATACATGTTAGCCAAGAACTCTACATCTCTGTAAGACGTTGTTACATCA
TGATTGTTAATTCACGTGCAATATTTTTCACAGTGTTATTTTAAGCTTTA
TTTTCACTTTAGAGGGCAGGAATCGTGTATATACTATGGTATGCTATGAG
GTTCAAGGACCACTTGTGGGAGTCAGTTCTCCCCTTCCACCCTGTGGATC
CTGGGGATCAGGCTCAGGTAGGTCATCAGGCTTGGCAGCAGGTGCCTTTA
CCAGCTGAGCCCTCCCCTCAGCCTGAACGTGCACACCTTCTAAGGATGGG
ATTTGAAACGTTTTGACAGATATGTATGTAGCTCCGGAACTACAGGATAC
ATATGACTTTTCTTCCATCACCTCCAAAAGCCAGCTTGAGTCTTTTTGGA
ATATATATCCTACCGGTCCTCAGCTTTGGGCATCTTCTGACCAATGGTTT
GTCCTTAATGTATTGTCTTTCTAGAATGTCATCCAAATGTAATGCCATTT
CATTATTG

Query= MSMg01no477_j10.b1 MSMg01no477_j10.b1 CHROMAT_FILE:
MSMg01no477_j10.b1 PHD_FILE: MSMg01no477_j10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:04 2005
         (439 letters)



>mm_chr2_105190441_105191279
          Length = 839

 Score =  841 bits (435), Expect = 0.0
 Identities = 438/439 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgagtggggctgagtccttcggccagcgactttggggttgcagctggcagtggtgatc 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 catgagtggggctgagtccttcggccagcgactttggggttgcagctgacagtggtgatc 260

                                                                       
Query: 61  aaaggtgcatccgtgagagatgacaaggactcagcactcacccagctacactctactgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaggtgcatccgtgagagatgacaaggactcagcactcacccagctacactctactgca 320

                                                                       
Query: 121 gaagtctgggggctggcaggttcaatctctagctccacatttttaattaaaagaaaaatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagtctgggggctggcaggttcaatctctagctccacatttttaattaaaagaaaaatc 380

                                                                       
Query: 181 tttagtgcataaagtatcattactcttaagcaatattaaaggccagcagatgctgaagtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttagtgcataaagtatcattactcttaagcaatattaaaggccagcagatgctgaagtg 440

                                                                       
Query: 241 ttgaaggaaaatcaccatcaaccttgactttttgttcaacaaaacaatttcaagtgaggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgaaggaaaatcaccatcaaccttgactttttgttcaacaaaacaatttcaagtgaggg 500

                                                                       
Query: 301 cctgtgaactttttcttaaagggctacataactttaatttttttcaaatcctatttttag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgtgaactttttcttaaagggctacataactttaatttttttcaaatcctatttttag 560

                                                                       
Query: 361 tgatggttcttaaatgctttaacttccttttagcccactacccatgagaggtagtggaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgatggttcttaaatgctttaacttccttttagcccactacccatgagaggtagtggaaa 620

                              
Query: 421 agaaaggatatgaaggtgg 439
           |||||||||||||||||||
Sbjct: 621 agaaaggatatgaaggtgg 639


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space:   356900
Effective search space used:   356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no477_j10.g1 MSMg01no477_j10.g1 CHROMAT_FILE:
MSMg01no477_j10.g1 PHD_FILE: MSMg01no477_j10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:04 2005
         (364 letters)



>mm_chr2_105348697_105349460
          Length = 764

 Score =  592 bits (306), Expect = e-173
 Identities = 344/364 (94%), Gaps = 12/364 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   acagtgttattttaagctttattttcactttagagggcaggaatcgtgtatatactatgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 acagtgttattttaagctttattttcactttagagggcaggaatcgtgtatatactatgg 687

                                                                       
Query: 61  tatgctatgaggttcaaggaccacttgtgggagtcagttctccccttccaccctgtggat 120
           ||||||| ||||| |||||||            |||||||||||||||||||||||||| 
Sbjct: 686 tatgctacgaggtccaaggac------------tcagttctccccttccaccctgtggag 639

                                                                       
Query: 121 cctggggatcaggctcaggtaggtcatcaggcttggcagcaggtgcctttaccagctgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 cctggggatcaggctcaggtaggtcatcaggcttggcagcaggtgcctttaccagctgag 579

                                                                       
Query: 181 ccctcccctcagcctgaacgtgcacaccttctaaggatgggatttgaaacgttttgacag 240
           ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 578 ccctcccctcagcctgaacatgcacaccttctaaggatgggatttgaaaagttttgacag 519

                                                                       
Query: 241 atatgtatgtagctccggaactacaggatacatatgacttttcttccatcacctccaaaa 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 atatgtatgtagctccagaactacaggatacatatgacttttcttccatcacctccaaaa 459

                                                                       
Query: 301 gccagcttgagtctttttggaatatatatcctaccggtcctcagctttgggcatcttctg 360
           ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 458 gccagcttgcgtctttttggaatatatatcctacccgtcctcagctttgggcatcttctg 399

               
Query: 361 acca 364
           ||||
Sbjct: 398 acca 395


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space:   268025
Effective search space used:   268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)