XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCA
AAAACAAATAATAATTTTACATATGTAAATGTATAAATATCCATTTAATA
TATGTAATATTTATATATATTTACAAAATCATCTTCTAGTCTGTGGCATT
AGTATTTCATGTAGCATTATTAGTTTTCCATTTGTAAATATATATAATTA
GTTGAGCTATGTTTAGGAAATTGTCTGGTGTTACTAAGTGATATTGTTCA
TATAAGTGATACACATATGTACAGTTAAAAATAAGTACGCATAACATATT
ACTAAGCTTGAGTAAACATAACATAGACTCTTATTGTACTCATCAAAAAC
TGATGCAATTTAGAAACTTTTAAAGACCTAGTCACTGTCACAGTGTGAAC
TATAAAAGAGAAAAGCAATAATAATAATTTAATTAGCAGCAAAACACTCA
TGAATAAAATATGTGAAGTGTGAATAAATACAATTTGTTAAGTTATGGAT
ATAAAAATACACTTCATTTTCTTACTGTCTACATAATTGGTCACCTTGCT
GACCTGAATTAGCCTCATCAGAGAGAAGATAGAGACTAGTCAGGAAATGG
TATTCAAACTTATGTGTGGATGGGACTTTTTAAATAAATGATAAGTGTTT
TAAAATTCCCTACTTATTCTCTTACTCCAGTCTATAACATTCTTAGTTGC
TGGTAAAGACACTTAGACTCCTTTGC

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTGCTCCAAGGGAATCAAAACTAAAATGTAGTCTTAAA
AATACGACTGGGGGAATAAAATCTGGAGTGTAAATAAATAAATAAATAAA
TAAATCAAAGACAAAAAAACTCAATGACTTAATGAAATTCTTAGGTAAAT
GGATGGAAGTAGAAAATATCATCCTGAGTCAGGTAACCCAATCACAGAAG
GACACACATGGTATGCACTCACTGATAAGTAGATATTAGCCCAAAAGCTT
GGAATAACCAAGATACAACTTTTTTTCCACATGAAGCCCAAGAAGAAGGA
AGACCAAAGAGTGGGTGCTTCAGTCCTTCTTAGAAGGGGAAACCCACAGT
AGGATATATAGAGACAAGGTGTGGAGCAGAGACTCACATAAAGACCATCC
AGAGACTGCCCCACCAGAGGAATCTTTCCCATATACAGTTACCAAACCCA
GACACTATTGTGAATACCAAGAAGTGCTTGCTGACGGGAGTCTGATATAG
CTGTCTCATGAGAGGCTCTGCCAGAACCTGCCAAATACAGAGGTAGATGC
TCACAGCCAACCATTGCACTGAGTACAGGGTCCACAATGGAGGAGTTAAA
GGACTGAAGGAGCTGAAGGGGTTAGCTACCCCATAGAAGGAACAACAAAA
TCAACCAACCAGTATTCCCAGAGCTCCCAGGGACTAAACCACCAACCAAA
GAGTACACATGGAGG

Query= MSMg01no477_p12.b1 MSMg01no477_p12.b1 CHROMAT_FILE:
MSMg01no477_p12.b1 PHD_FILE: MSMg01no477_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:34 2005
         (670 letters)



>mm_chr2_82084617_82085686
          Length = 1070

 Score = 1280 bits (662), Expect = 0.0
 Identities = 665/666 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaaaaacaaataataattttacatatgtaaatgtataaatatccatttaatata 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953 gaattccaaaaacaaataataattttacatatgtaaatgtataaatatccatttaatata 894

                                                                       
Query: 65  tgtaatatttatatatatttacaaaatcatcttctagtctgtggcattagtatttcatgt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 tgtaatatttatatatatttacaaaatcatcttctagtctgtggcattagtatttcatgt 834

                                                                       
Query: 125 agcattattagttttccatttgtaaatatatataattagttgagctatgtttaggaaatt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 agcattattagttttccatttgtaaatatatataattagttgagctatgtttaggaaatt 774

                                                                       
Query: 185 gtctggtgttactaagtgatattgttcatataagtgatacacatatgtacagttaaaaat 244
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gtctggtgttactaagtgctattgttcatataagtgatacacatatgtacagttaaaaat 714

                                                                       
Query: 245 aagtacgcataacatattactaagcttgagtaaacataacatagactcttattgtactca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 aagtacgcataacatattactaagcttgagtaaacataacatagactcttattgtactca 654

                                                                       
Query: 305 tcaaaaactgatgcaatttagaaacttttaaagacctagtcactgtcacagtgtgaacta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tcaaaaactgatgcaatttagaaacttttaaagacctagtcactgtcacagtgtgaacta 594

                                                                       
Query: 365 taaaagagaaaagcaataataataatttaattagcagcaaaacactcatgaataaaatat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 taaaagagaaaagcaataataataatttaattagcagcaaaacactcatgaataaaatat 534

                                                                       
Query: 425 gtgaagtgtgaataaatacaatttgttaagttatggatataaaaatacacttcattttct 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gtgaagtgtgaataaatacaatttgttaagttatggatataaaaatacacttcattttct 474

                                                                       
Query: 485 tactgtctacataattggtcaccttgctgacctgaattagcctcatcagagagaagatag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 tactgtctacataattggtcaccttgctgacctgaattagcctcatcagagagaagatag 414

                                                                       
Query: 545 agactagtcaggaaatggtattcaaacttatgtgtggatgggactttttaaataaatgat 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agactagtcaggaaatggtattcaaacttatgtgtggatgggactttttaaataaatgat 354

                                                                       
Query: 605 aagtgttttaaaattccctacttattctcttactccagtctataacattcttagttgctg 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aagtgttttaaaattccctacttattctcttactccagtctataacattcttagttgctg 294

                 
Query: 665 gtaaag 670
           ||||||
Sbjct: 293 gtaaag 288


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space:   699600
Effective search space used:   699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)