XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAATTCCAATA
TTCCCTTTAAGCAAAATAGCTCAATACAAAATTAACTCAGAAAAATTAGT
AGCCCTCAAATATACAAGTGACAAATCATCAGAGAAAGAAATCAGGAAAC
AACTTTCACGATAGCCTCAAATAATATAAATTATCTTGGGATATCTCTTA
CCAAAAATGTGAAAGGTTTTTATGATAAAAAAAAAAATCAAGGCATTGAA
GAAAACTTGAAGAGTTCATAAGATGGAAAGATCTTCCAGGCTCATGGATC
AGTAGGATTTTTTTAGTAAAACATAGCCATCCTACAAAAACCAATCTAGA
GATTCAATGCAGTTGGCATCAAAATTACAACCCAATTTATCACAGATCTT
GAAATGACAATTTTCAGCTTCATATGGAAACACAAAAAATCTAGGTCAGC
TAAAGCAATCCTGGATAATAAAAGAACTACTAGAGATAACATGATCCCCA
ATTTCAAGTTGCATTATGAAATTACAGTAGTAAAAGGAGCATGGTATCGG
GACAAAACCAGAAAAAGTTGATCACTGGAACAAAATTGAAGATGTGATTT
TCTTTATAAAGACTCCAGTAATAAATTGGAGAAAAAAAGACAGCATCTTC
AACAAATGGTGCTGGTCATGTAGAACAATGCAAATAGATCCATATTTATC
ACCCTGCACAAGACTCAACTCCAAATGGGTCAAAGACCTCAA

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXCTCACACATTACCAGTGTTCTCTAGAGGCCCATGCC
TCCTCTGGACACAATCTGTTTGTTCAGGGTTTGAATTTGATCATTTAAAT
GACTTTTAATTTTCACCACATTTAATCTTTTGAGAAAAACTGCATTTTCT
GGAAAAACCTTTATCCTCAGTAGTGAATGTCTTGATATCTTCCAGAACCT
CTGTATTTTCATTTCAAAGTACTGATGGAGAAAGAGCAAAAAGGAAAAAA
ATTAAAAATGCTGTAAATGTGTGACCTGTGACACATTTCAGGACCTGAAA
ATTTGCATTAGAAATCACCTAACAGGAAGGTCAGTAAAGTCAACAACTCT
TAAGAAAATCTAAAGTAATGTTTCTTCATTACTTTCTTTCTTCATGTACA
CATGAGAATATGTACCTATCCCAGGCAAGGAGAACATTCAGTGCTGTACT
TAAAGGATGGGATGACGTTTTACAGAGATCCTTTGAGCAGTTGAACTTTG
ACATGAAAAATGCATGAGAGTAGGTAAGATTAGTGGAAGCAACAGAATAA
AAGTTGTTATGACAATCGCAAGTATGAGTTACATCGATGTTTTCATTATG
TTCAACAGTGTTCCCAGCCCATTTCCACAGTAGTTTCTCGGGTCATTGTG
TCTGTGTTACGGCTCTTCTCAAACCATTATGCGTGAACTCT

Query= MSMg01no478_b14.g1 MSMg01no478_b14.g1 CHROMAT_FILE:
MSMg01no478_b14.g1 PHD_FILE: MSMg01no478_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:44 2005
         (669 letters)



>mm_chr2_54143718_54144787
          Length = 1070

 Score = 1050 bits (543), Expect = 0.0
 Identities = 647/693 (93%), Gaps = 26/693 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcacacattaccagtgttctctagaggcccatgcctcctctggacacaatctgtttgtt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctcacacattaccagtgttctctagaggcccatgcctcctctggacacaatctgtttgtt 239

                                                                       
Query: 61  cagggtttgaatttgatcatttaaatgactttta-a-ttttcaccacatttaatcttttg 118
           |||||||||||||||||||||||||||||  ||| | |||||||||||||||||||||||
Sbjct: 240 cagggtttgaatttgatcatttaaatgac--ttacagttttcaccacatttaatcttttg 297

                                                                       
Query: 119 agaaaaactgcattttctggaaaaacctttatcctcagtagtgaatgtcttgatatcttc 178
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 298 agaaaaactgcattttctggaacaacctttatcctcagtagtgaatgtcttgataccttc 357

                                                                       
Query: 179 cagaacctctgtattttcatttcaaagtactgatggagaaagagcaaaaagg-aaaaaaa 237
           |||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 358 cagaacctctgtgttttcatttcaaagtactggtggagaaagagcaaaaaggaaaaaaaa 417

                                                                       
Query: 238 ttaaaaatgctgtaaatgtgtgacctgtg-------aca-----ca------t--ttcag 277
           ||||||| ||| |||||||||||| ||||       |||     ||      |  |||||
Sbjct: 418 ttaaaaaggctataaatgtgtgacgtgtgatgagaaacaatttccaccgctgtccttcag 477

                                                                       
Query: 278 gacctgaaaatttgcattagaaatcacctaacaggaaggtcagtaaagtcaacaactctt 337
           ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 478 gacctgaaagtttgcattagaaatcacctaacaggagggtcagtaaagtcaacaactctt 537

                                                                       
Query: 338 aagaaaatctaaagtaatgtttcttcattactttctttcttcatgtacacatgagaatat 397
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 538 aagaaaatctaaagtaatgtttcttcattacttcctttcttcatgtacacatgagaatat 597

                                                                       
Query: 398 gtacctatcccaggcaaggagaacattcagtgctgtacttaaaggatgggatgacgtttt 457
           |||||||||| |||||||||||||||||||||||||| |||||||||| |||||| ||||
Sbjct: 598 gtacctatcctaggcaaggagaacattcagtgctgtatttaaaggatgagatgacatttt 657

                                                                       
Query: 458 acagagatcctttgagcagttgaactttgacatgaaaaatgcatgagagtaggtaagatt 517
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 658 acagagatcctttgagcagttgaactttgacatgaaaaatgcatgagagtaggtaatatt 717

                                                                       
Query: 518 agtggaagcaacagaataaaagttgttatgacaatcgcaagtatgagttacatcgatgtt 577
           ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 718 agtggaagcaacagaataaaagttgttatgacaattgcaagtatgagttacgtcgatgtt 777

                                                                       
Query: 578 ttcattatgttcaacagtgttcccagcccatttccacagtagtttctcgggtcattgtgt 637
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ttcatcatgttcaacagtgttcccagcccatttccacagtagtttctcgggtcattgtgt 837

                                            
Query: 638 ctgtgttacggctcttctca-aaccattatgcg 669
           ||||| || ||||||||||| ||||||||||||
Sbjct: 838 ctgtgctatggctcttctcacaaccattatgcg 870


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1070
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1060
Effective search space:   698540
Effective search space used:   698540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)