Query= MSMg01no478_f06.b1 MSMg01no478_f06.b1 CHROMAT_FILE:
MSMg01no478_f06.b1 PHD_FILE: MSMg01no478_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:02 2005
(672 letters)
>mm_chr2_101181443_101182514
Length = 1072
Score = 708 bits (366), Expect = 0.0
Identities = 387/394 (98%), Gaps = 2/394 (0%)
Strand = Plus / Minus
Query: 280 acccagaagatgctccaccataccacaaggatgtgtgctccattatattcatagcagcct 339
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1072 acccagaagatgctccaccataccacaaggatgtgtgctccattatattcatagcagcct 1013
Query: 340 gatttgtaatagccagaaactggaaggaacccaaatgtttctcaaccaaagaagggatac 399
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1012 gatttgcaatagccagaaactggaaggaacccaaatgtttctcaaccaaagaagggatac 953
Query: 400 agaaaatgtggttcatttataccatggaatactattcagctattaaaaatgaggacgtca 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 952 agaaaatgtggttcatttataccatggaatactattcagctattaaaaatgaggacgtca 893
Query: 460 tgaattttgcaggcaaatgcatggaactgagtgaggtaacccagactcaaaagacgtaca 519
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 892 tgaatttttcaggcaaatgcacggaactgagtgaggtaacccagactcaaaagacctaca 833
Query: 520 cattttaaaaaatgaatttgatttgttgtacttgcaaagggccacaggaacacagaagtg 579
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 832 cattttaaaaaatgaatttgatttgttgtacttgcaaagggccacaggaacacagaagtg 773
Query: 580 agcattctgctcagggcagtgagtg-attgtgtgcctcttcctgtgcctgtgcctgtgta 638
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
Sbjct: 772 agcattctgctcagggcagtgagtgca-tgtgtgcctcttcctgtgcctgtgcctgtgca 714
Query: 639 tgcgtgcatgtgtgtgtgtgtgtgtgtgtgtgtg 672
||||||||||||||||||||||||||||||||||
Sbjct: 713 tgcgtgcatgtgtgtgtgtgtgtgtgtgtgtgtg 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no478_f06.g1 MSMg01no478_f06.g1 CHROMAT_FILE:
MSMg01no478_f06.g1 PHD_FILE: MSMg01no478_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:02 2005
(671 letters)
>mm_chr2_101016779_101017847
Length = 1069
Score = 1143 bits (591), Expect = 0.0
Identities = 651/671 (97%), Gaps = 2/671 (0%)
Strand = Plus / Plus
Query: 1 caatgtgcagaatggatcagagagcttttctgtgaactttgcatagtttctggagaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatgtgcagaatggatcagagagcttttctgtgaactttgcatagtttctggagaaacc 260
Query: 61 atctggctcaggacaaagaagtgaataatgagactcaaagcaacctttcctagaaaggat 120
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctggctcaggacaaaggagagaataatgagactcaaagcaacctttcctagaaaggat 320
Query: 121 ttagccaaagtaattgaagagactaaaacgtcacagtgattgaaaatctaaagtcacaca 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 ttagccaaagtaattgaagagactaaaacctcacagtgattgaaaatctaaagtcacaca 380
Query: 181 attgacgtttaatatagaagtcataagcttttgtaggagctccagattgctgtccctgtt 240
||||||||||||||||||||||||||| | |||| |||| ||||||||||| ||||||||
Sbjct: 381 attgacgtttaatatagaagtcataagatcttgtgggagatccagattgctttccctgtt 440
Query: 241 ccagtatctctctttgagagacactaaaacagatctctgtgtctctagttgcctttccat 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagtatctctctttgagagacactaaaacagatctctgtgtctctagttgcctttccat 500
Query: 301 tttatgcttcatttttaattcacttttattttcatatagtttaataaaaattaattacat 360
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 tttatgcttcatttt-aattcacttttattttcatatagtttaataaaaaataattacat 559
Query: 361 tcgttccttctttttttcctccctccaatctctcccacgtcccctcactcataaccttcc 420
||||||||||| |||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 560 tcgttccttctctttt-cctccctccaatctttcccacgtcccctcacttataaccttcc 618
Query: 421 cataccttctcacacagcttctcaaactgatggtctttgatgttcggaagagcccccaga 480
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 619 cataccttctcacacagcttctcaaactgatggtctttgatgttcagaagagcccccaga 678
Query: 481 tcctgcaaactgaccaacatttgagttttgcatagctgatttcttcattctccctgggtt 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 679 tcctgcaaactgaccaacatttgagttttgcatggctgatttcttcattctccctgggtt 738
Query: 541 ttgagcatgccaaatctttgctgctagaacaccggggagaagtttcctacaactgggaaa 600
|||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 739 ttgagcatgccaaatctttgctgctagaacactggggagaagtttcctacgactgggaaa 798
Query: 601 gcttcagcttggaccataagcacttgagcttccccgggactatttcttcagtcttgatta 660
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 799 gcttcagcttggaccataagcacttgagcttccctgggactatttcttcagtcttgatta 858
Query: 661 aagcgagagga 671
|||||||||||
Sbjct: 859 aagcgagagga 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1069
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1059
Effective search space: 699999
Effective search space used: 699999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
