Query= MSMg01no478_g10.b1 MSMg01no478_g10.b1 CHROMAT_FILE:
MSMg01no478_g10.b1 PHD_FILE: MSMg01no478_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:07 2005
(192 letters)
>mm_chr2_103661391_103661983
Length = 593
Score = 340 bits (176), Expect = 2e-98
Identities = 188/192 (97%), Gaps = 1/192 (0%)
Strand = Plus / Minus
Query: 1 gtttaaatatttcaaatatcaccc-gagaatatttcaaatatcacctttgagaatacaca 59
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 392 gtttaaatatttcaaatatcaccctgagaatatttcaaatatcacccttgagaatacaca 333
Query: 60 gagagagttacgattggatagcatatagaagtacagagaaccaattcaggacaaaagatt 119
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gagagagttacaattggatagcatatagaagtacagagaaccaattcaggacaaaagatt 273
Query: 120 gaaaaattattttgagaactgggggaaattacataataaacacagacacacatagtagtg 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 gaaaaataattttgagaactgggggaaattacataataaacacagacacacatagtagtg 213
Query: 180 cagtgcaaaaac 191
||||||||||||
Sbjct: 212 cagtgcaaaaac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 593
Length adjustment: 8
Effective length of query: 184
Effective length of database: 585
Effective search space: 107640
Effective search space used: 107640
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no478_g10.g1 MSMg01no478_g10.g1 CHROMAT_FILE:
MSMg01no478_g10.g1 PHD_FILE: MSMg01no478_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:07 2005
(416 letters)
>mm_chr2_103489240_103490055
Length = 816
Score = 775 bits (401), Expect = 0.0
Identities = 412/416 (99%)
Strand = Plus / Plus
Query: 1 tcatttaagcaggtttcagaatgtcctcagagccactgtggaatcatggctactccctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcatttaagcaggtttcagaatgtcctcagagccactgtggaatcatggctactccctct 260
Query: 61 ggttatggttcctggaatagatgagagaattaatgactttaacttctgtcccatttccct 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ggttatggttcctggaatagatgagagaattaatgactttaacttctgccccatttccct 320
Query: 121 tatgtgtagaacagtaacttgagtttgagctttgtctaaggaggaagaaagaaaggatat 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 321 tatgtgtagaacagtaacttgagtttgagttttgtctaaggaggaagaaagaaaggatat 380
Query: 181 taggcaggcaggaagggagagaaagagtcaggcatggtggcatatactggagccagaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggcaggcaggaagggagagaaagagtcaggcatggtggcatatactggagccagaata 440
Query: 241 ggacttactcagtacttgctctaagactaggtgtcatgttagggtaaagctcttctaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggacttactcagtacttgctctaagactaggtgtcatgttagggtaaagctcttctaatg 500
Query: 301 ggaatagttagggactttagagagcaaagtgtttactccatttcaacttgagcaaatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaatagttagggactttagagagcaaagtgtttactccatttcaacttgagcaaatctc 560
Query: 361 tgatctccatgtcttgcatgttaatgttttatttgcctccgntgctctgttgtgga 416
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 tgatctccatatcttgcatgttaatgttttatttgcctccgttgctctgttgtgga 616
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space: 328449
Effective search space used: 328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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