Query= MSMg01no479_b05.b1 MSMg01no479_b05.b1 CHROMAT_FILE:
MSMg01no479_b05.b1 PHD_FILE: MSMg01no479_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:56 2005
(653 letters)
>mm_chr2_79476197_79477250
Length = 1054
Score = 1025 bits (530), Expect = 0.0
Identities = 543/554 (98%), Gaps = 11/554 (1%)
Strand = Plus / Minus
Query: 5 gaattccaatgccatctgacaaaaccctgtcccaggacttaaactccaaggagcaagttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gaattccaatgccatctgacaaaaccctgtcccaggacttaaactccaaggagcaagttg 484
Query: 65 gctagttttaataggtccccagagagacctaaggcacacaacacaaattaaaccccagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gctagttttaataggtccccagagagacctaaggcacacaacacaaattaaaccccagtt 424
Query: 125 agtgtagctaagtaaattaaactcgtctataacacgtttgaaaggaaaatgattctatgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agtgtagctaagtaaattaaactcgtctataacacgtttgaaaggaaaatgattctatgc 364
Query: 185 cagatatgcagatgccaaaataaagaaaaataaaaggttctgtgaaacatcaaaattatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cagatatgcagatgccaaaataaagaaaaataaaaggttctgtgaaacatcaaaattatt 304
Query: 245 tcaagagaaagcacgaccagccaaagtagcatcactgtgacctgttttagtttctgatct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tcaagagaaagcacgaccagccaaagtagcatcactgtgacctgttttagtttctgatct 244
Query: 305 gctgctgacatcatgcccggactgctgaagtcgtaactgtaaagtcaactcggtcaccaa 364
|||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 243 gctgctgacatcatgcccggactgctgaagtc-----------gtcaactcggtcaccaa 195
Query: 365 ataatcagcggccacagcacttccagttctaatcgcttctagaaggaagctatcggccgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ataatcagcggccacagcacttccagttctaatcgcttctagaaggaagctatcggccgg 135
Query: 425 ctcactttccggttcctagcttacagtgaccacgggacccagagacgaagtcgaaccccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ctcactttccggttcctagcttacagtgaccacgggacccagagacgaagtcgaaccccc 75
Query: 485 tcgcttctcccccaggcaacccccgctttacttaccggcagtctttgagccatatcgcga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 tcgcttctcccccaggcaacccccgctttacttaccggcagtctttgagccatatcgcga 15
Query: 545 tcttctcgttgggc 558
||||||||||||||
Sbjct: 14 tcttctcgttgggc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1054
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1044
Effective search space: 671292
Effective search space used: 671292
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_b05.g1 MSMg01no479_b05.g1 CHROMAT_FILE:
MSMg01no479_b05.g1 PHD_FILE: MSMg01no479_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:58:56 2005
(632 letters)
>mm_chr2_79301630_79302661
Length = 1032
Score = 1207 bits (624), Expect = 0.0
Identities = 630/632 (99%)
Strand = Plus / Plus
Query: 1 acccctagagtttcactttctttaaataaagtctcttctttctttctttaaaagatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acccctagagtttcactttctttaaataaagtctcttctttctttctttaaaagatgcat 260
Query: 61 ttccacttgaattaaatattgataatttgaccttttgtgtctttaattcatcaaagtggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccacttgaattaaatattgataatttgaccttttgtgtctttaattcatcaaagtggg 320
Query: 121 aaaattccaaatgtagatcttggagttaggccctggtgggtctttccacttgaatagaca 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaattccaaatgtagatcttggaggtaggccctggtgggtctttccacttgaatagaca 380
Query: 181 ccgagattaaaggagtccaacttcctctttcactgctctctccttgcgctaattgcttat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaagattaaaggagtccaacttcctctttcactgctctctccttgcgctaattgcttat 440
Query: 241 gcaaaaatgcagatttgtattaattagtaactccactgattagttctgtggtattttcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaaaaatgcagatttgtattaattagtaactccactgattagttctgtggtattttcac 500
Query: 301 ataataaatcatgctgcagacatgaattttggcacatcaccccattgtggctccggctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataataaatcatgctgcagacatgaattttggcacatcaccccattgtggctccggctgt 560
Query: 361 aatacagatttcctattaaaattaaatctctgactgaatctacctttctgatgcaggtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatacagatttcctattaaaattaaatctctgactgaatctacctttctgatgcaggtac 620
Query: 421 catgagtagccacctgctgggagcacctgccatgggaagttatttttacccagtgacaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 catgagtagccacctgctgggagcacctgccatgggaagttatttttacccagtgacaag 680
Query: 481 ccactctgaggccccaacagaacaatctgattacaaggttaggctctaataataaacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccactctgaggccccaacagaacaatctgattacaaggttaggctctaataataaacaaa 740
Query: 541 tagttataggcaggcagacataatacaaatatgacttcactttagtcattttgtcccaca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tagttataggcaggcagacataatacaaatatgacttcactttagtcattttgtcccaca 800
Query: 601 acaatgtcataacagaggatctatttgtatca 632
||||||||||||||||||||||||||||||||
Sbjct: 801 acaatgtcataacagaggatctatttgtatca 832
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1032
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1022
Effective search space: 635684
Effective search space used: 635684
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
