Query= MSMg01no480_f10.b1 MSMg01no480_f10.b1 CHROMAT_FILE:
MSMg01no480_f10.b1 PHD_FILE: MSMg01no480_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:36 2005
(587 letters)
>mm_chr2_46975529_46976515
Length = 987
Score = 1112 bits (575), Expect = 0.0
Identities = 581/583 (99%)
Strand = Plus / Minus
Query: 5 gaattctctaaatccctttaaagtcaaaaaataaaggcaaggcacttataaccaaatttg 64
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 gaattctctaaattcatttaaagtcaaaaaataaaggcaaggcacttataaccaaatttg 826
Query: 65 cactaataattttggattaattaattaattaattaatttatcaaacaaaaatgagcagaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 cactaataattttggattaattaattaattaattaatttatcaaacaaaaatgagcagaa 766
Query: 125 ggcactggattttatggatcatctaagagtaaatgatcctcttgatgtgaaactcatgaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 ggcactggattttatggatcatctaagagtaaatgatcctcttgatgtgaaactcatgaa 706
Query: 185 ttggttctagcagatgaatatgttagcaagtagaatatgccctgtacgatatttctgaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ttggttctagcagatgaatatgttagcaagtagaatatgccctgtacgatatttctgaca 646
Query: 245 tcactatggttctatttctagcttagttgattaattaattgattcattggaaatatactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tcactatggttctatttctagcttagttgattaattaattgattcattggaaatatactg 586
Query: 305 aaagtgtaatgtaaaactactaatactatgtgttaagtataacatatacatatatattgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aaagtgtaatgtaaaactactaatactatgtgttaagtataacatatacatatatattgg 526
Query: 365 catgctttagaaaatctagggagaaataccttctttggcaattattatctctaaagcaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 catgctttagaaaatctagggagaaataccttctttggcaattattatctctaaagcaga 466
Query: 425 cagatgccacatgcaaattaagactgtacaattacttgataaacagatcaatccaaatga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 cagatgccacatgcaaattaagactgtacaattacttgataaacagatcaatccaaatga 406
Query: 485 ctaggtagagtctcagacatcccccagagacagtggctaactgtaagttaggaatgagtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ctaggtagagtctcagacatcccccagagacagtggctaactgtaagttaggaatgagtg 346
Query: 545 tgaagagctctttcacacctacacttagagaagtggtgagaca 587
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tgaagagctctttcacacctacacttagagaagtggtgagaca 303
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_f10.g1 MSMg01no480_f10.g1 CHROMAT_FILE:
MSMg01no480_f10.g1 PHD_FILE: MSMg01no480_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:37 2005
(233 letters)
>mm_chr2_46818980_46819613
Length = 634
Score = 416 bits (215), Expect = e-121
Identities = 230/235 (97%), Gaps = 3/235 (1%)
Strand = Plus / Plus
Query: 1 ctaaagtggtcaatttgcattaaccacaagaaaacatgtccaggtgtagctagctgcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaagtggtcaatttgcattaaccacaagaaaacatgtccaggtgtagctagctgcctt 260
Query: 61 gagttttcctctaccatttagtggttcttaaaacctacttcacacaataaaatattcact 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 gagttttcctctaccatttagtggttcttaaagcctacttcacacaataaaatattcact 320
Query: 121 tatctttcatatcttattatcagaaaaggaatcttatatctacagtttttttt-aaatta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tatctttcatatcttattatcagaaaaggaatcttatatctacagtttttttttaaatta 380
Query: 180 acttatgcagttttttt-ctttaaaaaaaactttattataaaaagaaagattgta 233
||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||
Sbjct: 381 acttatgcagttttttttctttaaaaaaa-ctttattataaaaagaaacattgta 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 634
Length adjustment: 9
Effective length of query: 224
Effective length of database: 625
Effective search space: 140000
Effective search space used: 140000
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
