Query= MSMg01no480_j18.b1 MSMg01no480_j18.b1 CHROMAT_FILE:
MSMg01no480_j18.b1 PHD_FILE: MSMg01no480_j18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:58 2005
(635 letters)
>mm_chr2_65548219_65549254
Length = 1036
Score = 1114 bits (576), Expect = 0.0
Identities = 621/636 (97%), Gaps = 3/636 (0%)
Strand = Plus / Minus
Query: 1 ggtctattcattttaatgcattgaaatctgcaactattgtatcaaatatatgaaatgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ggtctattcattttaatgcattgaaatctgcaactattgtatcaaatatatgaaatgaaa 776
Query: 61 tttaatgttaaaaatgttaggaaagcatgcagtgttttaaagaaggatttaagctaaatg 120
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 775 tttaatgttaaaaatgttaggaaagcattcagtgtttgaaagaaggatttaagctaaatg 716
Query: 121 acaatgtagtattaaacttatctgacaattgtctacaaggctttttgatcatttcctcta 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 715 acaatgtagtattaaacttatctgacaattgtctacaagactttttgatcatttcctcta 656
Query: 181 aaattaagtggtaaagagaccttctagaggacacctgtttggtaaccattgacaacgtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 aaattaagtggtaaagagaccttctagaggacacctgtttggtaaccattgacaacgtct 596
Query: 241 tctgggatactgtgaagcagaaaactatcattttcttctttctttggtcagatgatcact 300
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 595 tctgggaaactgtgaagcagaaaactatcatttccttctttctttggtcagatgatcact 536
Query: 301 tagcacagtcttcagtgggaaaggataccaggtttggtgcattcttccaacaccattgca 360
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 535 tag-acagtcttcagtgggaaaggataccaggtttggtgtattcttccaacaccattgca 477
Query: 361 gaaaattacctgctctgacaaacatgtgatcatctcttcttagcactcaacagaaggaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gaaaattacctgctctgacaaacatgtgatcatctcttcttagcactcaacagaaggaag 417
Query: 421 ctttccttcttcattccttggcatgtggtctgtggccagtcac-ttagcactactgtagc 479
|||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 416 ctttccttcttcattctttggcatgtggtctctggccagtcacattagcactactgtagc 357
Query: 480 aactagggca-tcctccaccattgatggagcttacagtgaagtgaaatttataagggagg 538
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aactagggcattcctccaccattgatggagcttacagtgaagtgaaatttataagggagg 297
Query: 539 aggcagcatagaaaatggagaagaatgttgctagatatttgttctgctaatgaacatatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 296 aggcagcatagaaaatggagaagaatgttgctagatatttgttctgctaatgaacatttg 237
Query: 599 ctacttatttatgcgataaggtcaattactttctta 634
|||||||||||||| ||| |||||||||||| ||||
Sbjct: 236 ctacttatttatgcaatacggtcaattacttcctta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1036
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1026
Effective search space: 641250
Effective search space used: 641250
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_j18.g1 MSMg01no480_j18.g1 CHROMAT_FILE:
MSMg01no480_j18.g1 PHD_FILE: MSMg01no480_j18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:58 2005
(619 letters)
>mm_chr2_65367532_65368550
Length = 1019
Score = 1060 bits (548), Expect = 0.0
Identities = 602/620 (97%), Gaps = 2/620 (0%)
Strand = Plus / Plus
Query: 1 ttctcttgtaaacagatacagaaagcagcctcacagtgatgtcactcagttcttgatggt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttctcttgtaaatagatacagaaagcagcctcacagtgatgtcactcagttcttgatggt 260
Query: 61 ttatagcactctctggaggggatgttttgcgctaacaaggtagtatcattagctgttctg 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatagcactctctgaaggggatgttttgcgctaacaaggtagtatcattagctgttctg 320
Query: 121 gtagggatattgtttttgatgtttcaatacagatttcactgcagagaagctcatgtgaca 180
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 321 gtagggatattgtttttgatgtttcaatacagatttcactgcacagaagttcatgtgaca 380
Query: 181 tatacttttattttaaaatataaacaccttctaatatcaagcctgagaatgagcgagttc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 aatacttttattttaaaatataaacaccttctaatatcaagcctgagaatgagagagttc 440
Query: 241 atatggtatttc-taggattacctcctgcttcctgtgtccacaagataatgtattttact 299
|||||| ||||| || |||| |||||| |||||||||||||||||||||||||||||||
Sbjct: 441 atatgg-atttcaaagaattatctcctgtttcctgtgtccacaagataatgtattttact 499
Query: 300 ttatataagcctgtgaggtagactatagaaaatgtccactactgaacaccattttaaagg 359
|||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 500 ttatataagcctgtaaggtagactatagaaaatgtgtactactgaacactattttaaagg 559
Query: 360 tattttgtcattactccagggtctactgcaatctatgcttattcttcccataacatgaat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tattttgtcattactccagggtctactgcaatctatgcttattcttcccataacatgaat 619
Query: 420 attgtactattatagtttgcacctgtatatgccatactgggaacaaaacttgtccccttg 479
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gttgtactatgatagtttgcacctgtatatgccatactgggaacaaaacttgtccccttg 679
Query: 480 aacatgctgggctagttttgtaccactgagtcacatcacagacccataaagaattttaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aacatgctgggctagttttgtaccactgagtcacatcacagacccataaagaattttaag 739
Query: 540 gttgttgactttttgatatattattatccaagtacagagacacatagctgttttgtgaat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gttgttgactttttgatatattattatccaagtacagagacacatagctgttttgtgaat 799
Query: 600 gtttccaggaggaaaaaaga 619
||||||||||||||||||||
Sbjct: 800 gtttccaggaggaaaaaaga 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
