Query= MSMg01no481_e03.b1 MSMg01no481_e03.b1 CHROMAT_FILE:
MSMg01no481_e03.b1 PHD_FILE: MSMg01no481_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:50 2005
(599 letters)
>mm_chr2_174693169_174694167
Length = 999
Score = 1137 bits (588), Expect = 0.0
Identities = 596/599 (99%)
Strand = Plus / Plus
Query: 1 cacgaggatttgttttattaatctttgaacccagttctgtgtttaaaatgctttacctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgaggatttgttttattaatctttgaacccagttctgtgtttaaaatgctttacctag 260
Query: 61 aaattattctatacaagaacaaagcaagttctagcgatgtggtgagggagcgcacgggga 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 aaattattctatacaagaacaaagcaagttctagcgatgtggtgagggagtgcacgggga 320
Query: 121 ccctctgattgacactttcattgaatgtttaaaaccatccacagaagctcgcgccaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctctgattgacactttcattgaatgtttaaaaccatccacagaagctcgcgccaacat 380
Query: 181 ttcatacgctgttggctgttttcatctaaattacttgatggaagaacttcgcttttaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatacgctgttggctgttttcatctaaattacttgatggaagaacttcgcttttaggt 440
Query: 241 tttctgatactgtatctctcaagttgcatcctgtatctttctgagaagtttccaggcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttctgatactgtatctctcaagttgcatcctgtatctttctgagaagtttccaggcaca 500
Query: 301 gaaagttcacataatcccagcatgagctttctctatcagggtctgctttctatgtgtcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaagttcacataatcccagcatgagctttctctatcagggtctgctttctatgtgtcaa 560
Query: 361 cacggacaggagggaccagcagacgagtccaggagctcagtccaactctgcaaccagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cacggacaggagggaccagcagacgagtccaggagctcagtccaactctgcaaccagaac 620
Query: 421 cttccaacatgtcaataaatcctgctacaattccaggaaaaataaccagcaatgggtctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 cttccaacatgtcaataaatcctgctacaattccaggaaaaataaccagcagtgggtctc 680
Query: 481 aacatcatgtggacgatttatgtccctgaactggaattttgatttgaccttggaggctac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aacatcatgtggacgatttatgtccctgaactggaattttgatttgaccttggaggctac 740
Query: 541 tttcaggagccaagacacattatangaggtggtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 741 tttcaggagccaagacacattataggaggtggtgtgtgtgtgtgtgtgtgtgtgtgtgt 799
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
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Sbjct: 71 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 44
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
||||||||||||||||||||||||||||
Sbjct: 73 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 46
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
||||||||||||||||||||||||||||
Sbjct: 75 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 48
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
||||||||||||||||||||||||||||
Sbjct: 77 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 50
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
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Sbjct: 79 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 52
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
||||||||||||||||||||||||||||
Sbjct: 81 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 54
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
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Sbjct: 83 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 56
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
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Sbjct: 85 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 58
Score = 54.9 bits (28), Expect = 2e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 572 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 599
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Sbjct: 87 gtgtgtgtgtgtgtgtgtgtgtgtgtgt 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 10
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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