Query= MSMg01no481_o20.b1 MSMg01no481_o20.b1 CHROMAT_FILE:
MSMg01no481_o20.b1 PHD_FILE: MSMg01no481_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:43 2005
(645 letters)
>mm_chr2_14178334_14179378
Length = 1045
Score = 731 bits (378), Expect = 0.0
Identities = 417/432 (96%), Gaps = 4/432 (0%)
Strand = Plus / Minus
Query: 1 tactcaggcatgcttacctggtagccagttcagataccggaatgggcttcctccagccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tactcaggcatgcttacctggtagccagttcagataccggaatgggcttcctccagccca 369
Query: 61 ctgccaaccagtgcgtacactcagactgttgagtccaatccagagtcccgagctcaagga 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctgccaaccactgcgtacactcagactgttgagtccaatccagagtcccgagctcaagga 309
Query: 121 actggttaatcctatagggcaaaaacaatacaaacacagaacaggcattgagaaatgaca 180
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||
Sbjct: 308 actggttaatcctatagggcaaaaacaacacaagcacagaacaggcattgagaaatgaca 249
Query: 181 gtgaaattaaatccagaattaaatgttttaatccaagttgtcaaagaaggtgctggaaag 240
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct: 248 gtgaaattaaatccagaattaaatgtgttaatccgagttgtcaaagaaggtgctggaaag 189
Query: 241 atagctaagtagttgagagcacacactgctcttacagaggaccctagttaggttactagc 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 atagctgagtagttgagagcacacactgctcttacagaggaccctagttaggttactagc 129
Query: 301 acccatactgggaggctcacaaccatctctaactcctgctccaggggatccaaggccttc 360
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 128 acccatattgggaggctcacaaccatctctaactcctgctccaagggatccaaggccttc 69
Query: 361 tgtcctctaaacgaacttgcatacacatacatacatgcatgcatgaacacatgcacacac 420
|| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 68 tgccctctaaacgaacttgcatatacatacatacatgcatgca----cacatgcacacac 13
Query: 421 acacatacatac 432
||||| ||||||
Sbjct: 12 acacacacatac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_o20.g1 MSMg01no481_o20.g1 CHROMAT_FILE:
MSMg01no481_o20.g1 PHD_FILE: MSMg01no481_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:43 2005
(674 letters)
>mm_chr2_14009676_14010749
Length = 1074
Score = 1282 bits (663), Expect = 0.0
Identities = 672/675 (99%), Gaps = 1/675 (0%)
Strand = Plus / Plus
Query: 1 cagaagactaagacagggagatctctgagttcaaggtcatatgggatttaaggtgtgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cagaagactaagacagggagatctctgagttcaaggtcatatgggatttaaggtgtgatg 259
Query: 61 gaacacatactaatctgggctacaccttctgttggagacctacataaaggacattggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gaacacatactaatctgggctacaccttctgttggagacctacataaaggacattggaag 319
Query: 121 aaagatttactctctctcttcttcacctgcttgctttttgggactaagcaactgaaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aaagatttactctctctcttcttcacctgcttgctttttgggactaagcaactgaaagat 379
Query: 181 ccttagatttccatttacagctgctgtcattggtgagagttggactacagactataagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccttagatttccatttacagctgctgtcattggtgagagttggactacagactataagtc 439
Query: 241 atcaacaaattcccttactatatagaaactatctataagttctgtgactatagagaaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atcaacaaattcccttactatatagaaactatctataagttctgtgactatagagaaccc 499
Query: 301 tgactaata-cagtctcttaaagcaaatcatcagttgttttctactcactactgcttact 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgactaataacagtctcttaaagcaaatcatcagttgttttctactcactactgcttact 559
Query: 360 cattttcttcttagtattcagtactgacatcaagttcatcaattgatggtcttgtgtggc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cattttcttcttagtattcagtactgacatcaagttcatcaattgatggtcttgtgtggc 619
Query: 420 ataaacttcataaagaatatttcagtcttgtctctggtacctcaggggtaattcctaaga 479
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 620 ataaacttcataaagaatatttcagtcttgtctctggtacctcaggggcaattcctaaga 679
Query: 480 catattaaaccccataatttatctagtaatgacttactgacagttttctagattgtcagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 catattaaaccccataatttatctagtaatgacttactgacagttttctagattgtcagt 739
Query: 540 ttggtgttcggttaccacttaaaaatcaatctattagaaacttgaatttatctttccatg 599
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 740 ttggtgttcggttaccacttaaaaatcagtctattagaaacttgaatttatctttccatg 799
Query: 600 atgttcttttcattaattgattattttataatgttccatttatcttgacttttgggtttt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atgttcttttcattaattgattattttataatgttccatttatcttgacttttgggtttt 859
Query: 660 gagacagggtttcac 674
|||||||||||||||
Sbjct: 860 gagacagggtttcac 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
