TCGTTTTGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXCGCGGAATTCTCTGATTCCGGAACTGTGTTATATGTAAGTCTTTTA
TAACTCTAATTTAGTTTAAATTATAATTTATAATTTATAGGCAGTAATAC
CTTCTTTACAAAATAGGAAGACTAAAACATTTTCCTTTAAAAATTTTTAA
TAAAAATGTAATCATATCGCATGCCTTTTTAAAAATTAGATATTTTCTTT
ATATACATTTCAAATGCTATCCAGAAAGTTCCCTATACCCTCCCCCTGCC
CTACTCCCCTACCCACCCACTCCCTCTTCTTGGCCCTGGCCTTCCCCTGT
AGGGGGCATATAAAGGGGCCTCTCTTCCCAGTGATGGCTGACTAGGCCAT
CTTCTGCTACATATGCAGCTACACATACAAGCTCTTGGGGTACTGATCAA
TTCATACTGTTGTTCCTCCTATAGGGTTGCAGATCCTTTCAGCTCCTTGG
GTGCTTTCTCTAGCTTCTCCATTGGGGTCCCTGTGTTCCATCTTATTGAT
GACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCATA
TGAGACATCTATAACAGGGTCCCTTCAGCAAAATCTTGACTTTTTCTAAT
TGGTTTTCAAATCGTCTTAAGCCATTCCCTGCACAACTCCATCTTAAATT
TGTGGTTCTTTTCTCTTCAATATTACTGATATACAAACACACACC

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGCCTTTAACTAGGAGCCTTACCTAATAAA
ATAGCAGAAAAATATGTGCCTTTACCTGCTTCCCTGTATGGCATGGGGAA
AGTGGCTATAAAAAAGGCTAAGGGGATAATAACCAATGAAGAACTAAACA
CATGGAAGATTCAGAGAGCTATAGAATAGGACTAATGTGAAGGAGAACTC
TGTGCATCGCACAGATTTTGGCCTGACTGGCTATTGCAGAGAAGGATCGC
AGTGCAGGTGTTTCTTATATTTGGTGAGACTCATGAATATAACTGTATCC
AAAGACTCTCATGATATACATGCCTCATACTAACTCCTGATCATCTTTGA
ATGTACTGATTGTGCTATAATAGTGCTGTATAAGGAGTGATGAATTTATT
GGTTATTTACAGATTAAATGTTTCCCATTGCACATAAAATTTCATGTTAT
TCATGGTGAATTTATCCTAGACTGCTGAGTAAGTTAAGTCTTGCTTTTGA
TATATATATATATATATATATATATATATATATATATATATATATATATA
TATATATCTATAGAACTATATTGATATCTCTNAAATACAGCCCTTTCCTC
TTTCTCCTCCCCTAGTCTTCTTGCTCTTCTTCATTCCTCATCTCATACTA
CTCTTCTACCCCTCCCCCTCTCTCTCATTATCTTCCTATTCTTTTGTGTA
GTCG

Query= MSMg01no483_k06.g1 MSMg01no483_k06.g1 CHROMAT_FILE:
MSMg01no483_k06.g1 PHD_FILE: MSMg01no483_k06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:04:54 2005
         (542 letters)



>mm_chr2_47474912_47475853
          Length = 942

 Score =  909 bits (470), Expect = 0.0
 Identities = 485/490 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ctttaactaggagccttacctaataaaatagcagaaaaatatgtgcctttacctgcttcc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctttaactaggagccttacctaataaaatagcagaaaaatatgtgcctttacctgcttcc 620

                                                                       
Query: 64  ctgtatggcatggggaaagtggctataaaaaaggctaaggggataataaccaatgaagaa 123
           || ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 619 ctttatggcatggggaaagtggctataaaaaaggctaaggggataataaccattgaagaa 560

                                                                       
Query: 124 ctaaacacatggaagattcagagagctatagaataggactaatgtgaaggagaactctgt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctaaacacatggaagattcagagagctatagaataggactaatgtgaaggagaactctgt 500

                                                                       
Query: 184 gcatcgcacagattttggcctgactggctattgcagagaaggatcgcagtgcaggtgttt 243
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcattgcacagattttggcctgactggctattgcagagaaggatcgcagtgcaggtgttt 440

                                                                       
Query: 244 cttatatttggtgagactcatgaatataactgtatccaaagactctcatgatatacatgc 303
           || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ctaagatttggtgagactcatgaatataactgtatccaaagactctcatgatatacatgc 380

                                                                       
Query: 304 ctcatactaactcctgatcatctttgaatgtactgattgtgctataatagtgctgtataa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ctcatactaactcctgatcatctttgaatgtactgattgtgctataatagtgctgtataa 320

                                                                       
Query: 364 ggagtgatgaatttattggttatttacagattaaatgtttcccattgcacataaaatttc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggagtgatgaatttattggttatttacagattaaatgtttcccattgcacataaaatttc 260

                                                                       
Query: 424 atgttattcatggtgaatttatcctagactgctgagtaagttaagtcttgcttttgatat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atgttattcatggtgaatttatcctagactgctgagtaagttaagtcttgcttttgatat 200

                     
Query: 484 atatatatat 493
           ||||||||||
Sbjct: 199 atatatatat 190


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 75
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space:   495824
Effective search space used:   495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)