NCCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTCCTTGTGCCTTAACATAGCCTAATCTGTATGGATATGCAGGC
TTTTTGTTTTCTGAGACTTTGGGAGCCACCCAGAGAAGAAGGAGAGGAAA
GGAAGTTGGAATCAGGGACAGTGACAGACAGATGGGATTATGACATGAGG
ATCAAACGTGTGCCCTTGGTTCTATTGACATTATTCTCTGGACAGCTGAG
ATAATAAGTCCAGGGGAAAATATATTTGGCCACTTAGTCACAATCACACA
TGAAACCATCTGCCAGGAGGCTTCTTACAAACGTTTTCTGTCCACTGTAT
GATGAGAACACTGTCTGTTTCCTGGGGACTCACAGTCCAGAAGTCAGGGA
AGCTTAGTCACAAAATCAGGACCATTCAAGTTGGTTCACTTAAGATTTCT
AAGAGTGCCGGGCGGTGGTGGCACACACCTTTAATCCCAGCACTTGGGAG
GCAGAGGCAGGTGGATTTCTGAGTTTGAGGACAGCCTGGTCTACAAAGTG
AGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAAAAACC
AAAACCAAAACCAAAACCAAACCTCCCCCCCCCAAAAAAAATTCCTGAGT
CCATCTCAAACATAAAGTAAATCTAACTTATTTGCTGTAAAGTATTTGTA
TGAGTTCAGGAAAAAAAAAGGCTATTTTAATAATGTGATCAGGACGTATT
TTAGATACTTTCTAAACATGGATACCAACACTATN

NGGCAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTTAATCCACTTAGATTTGACCT
TAGTACAAGGAGATAGGAATGGATCAATTCCCATTCTTCTACATGATAAC
TGCCAGTTGTGCCAGCACCACTTGTTGAAAATGCTGTCTTTTTTCCACTG
GATGGTTTTTGCTCCCTTGTCAAAGATCAAGTGACCATGGGTGTGTGGGT
CCATTTCTGGGTCTTCAATTTTATTCCATTGTTCTACTTGTCTGTTGCTA
TACTAGTACCATGCAGTTTTTATCACAATTGCTCTGCAGTACAGCTTGAG
GTCAGGCATGGTGATTCCACCAGAGGTTTTTTTATCCTTGAGAAGAGTTT
TTGCTATCCTAGGTTTTTTGTTACTCCAGATGAATTTGCAGATTCCCCTT
TCTAATTCGTTGAAGAATTGAGTTGGAATTTTGATGGGGATTGCATTGAA
TCTGTAGATTGCTTTTGGCAAGATAGCCATTTTTACTATATTGATCTTCT
TTAATTTCTTTCTTCAGAGACTTGTTCTTATCATACAGATCATTCACTTC
CTTAGTTAGAGTCACGCCAAGGTATTTTATATTATTTGTGACTATTGAGA
ACGGTGTTGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTTTGTGTAC
AGAAAGCCATTGACTTGNTTGAGTTAATTTTAAATCCAGCTATTTCATTG
AAGCTGTTTCTCAGGTTTTAGGAGTCTCTGGGTAGATTTTTAAGGGTCAC
T

Query= MSMg01no483_m17.b1 MSMg01no483_m17.b1 CHROMAT_FILE:
MSMg01no483_m17.b1 PHD_FILE: MSMg01no483_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:08 2005
         (576 letters)



>mm_chr2_69084116_69085091
          Length = 976

 Score = 1083 bits (560), Expect = 0.0
 Identities = 573/578 (99%), Gaps = 2/578 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagcctaatctgtatggatatgcaggctttttgttttctgagactttgggagccaccca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagcctaatctgtatggatatgcaggctttttgttttctgagactttgggagccaccca 260

                                                                       
Query: 61  gagaagaaggagaggaaaggaagttggaatcagggacagtgacagacagatgggattatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaagaaggagaggaaaggaagttggaatcagggacagtgacagacagatgggattatg 320

                                                                       
Query: 121 acatgaggatcaaacgtgtgcccttggttctattgacattattctctggacagctgagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatgaggatcaaacgtgtgcccttggttctattgacattattctctggacagctgagat 380

                                                                       
Query: 181 aataagtccaggggaaaatatatttggccacttagtcacaatcacacatgaaaccatctg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataagtccaggggaaaatatatttggccacttagtcacaatcacacatgaaaccatctg 440

                                                                       
Query: 241 ccaggaggcttcttacaaacgttttctgtccactgtatgatgagaacactgtctgtttcc 300
           |||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaggaggcaccgtacaaacgttttctgtccactgtatgatgagaacactgtctgtttcc 500

                                                                       
Query: 301 tggggactcacagtccagaagtcagggaagcttagtcacaaaatcaggaccattcaagtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggggactcacagtccagaagtcagggaagcttagtcacaaaatcaggaccattcaagtt 560

                                                                       
Query: 361 ggttcacttaagatttctaagagtgccgggcggtggtggcacacacctttaatcccagca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttcacttaagatttctaagagtgccgggcggtggtggcacacacctttaatcccagca 620

                                                                       
Query: 421 cttgggaggcagaggcaggtggatttctgagtttgaggacagcctggtctacaaagtgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgggaggcagaggcaggtggatttctgagtttgaggacagcctggtctacaaagtgag 680

                                                                       
Query: 481 ttccaggacagccagggctatacagagaaaccctgtctcgaaaaaaccaaaaccaaaacc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttccaggacagccagggctatacagagaaaccctgtctcgaaaaaaccaaaaccaaaacc 740

                                                 
Query: 541 aaaaccaaacctccccccccc--aaaaaaaattcctga 576
           |||||||||||||||||||||  |||||||||||||||
Sbjct: 741 aaaaccaaacctcccccccccccaaaaaaaattcctga 778


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)