Query= MSMg01no484_h17.b1 MSMg01no484_h17.b1 CHROMAT_FILE:
MSMg01no484_h17.b1 PHD_FILE: MSMg01no484_h17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:04 2005
(478 letters)
>mm_chr2_27659611_27660488
Length = 878
Score = 797 bits (412), Expect = 0.0
Identities = 458/478 (95%), Gaps = 11/478 (2%)
Strand = Plus / Plus
Query: 1 tctagttccttaactagtattactcttctccattaagcacagtctggtagtgaaagtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctagttccttaactagtattactcttctccattaagcacagtctggtagtgaaagtctg 260
Query: 61 ggatttgaaccttgggggacaatatgttttcctgccagaccctgacttagccacgtctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ggatttgaaccttgggggacaatatgttttcctgccagaccctgacttagctacgtctaa 320
Query: 121 atttaaatctccctgactgtgaactcagggtgatctctccatgtggatgtccaacagacc 180
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 321 atttaaacctccctgactgtgaactcagggtgatctctccatgtgggggtccaacaggcc 380
Query: 181 cccaagagcaagtccctcctaaactctgtgtttgtcccattctcaatggccgaagttacc 240
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 cccaagagcaagtccctcccaaactctgtgtttgccccattctcaatggccgaagttacc 440
Query: 241 aagcagctaattattttt----ccaaaggtctgagtcactttttacccttcctaggcttg 296
||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcagctaatta-----gcagccaaaggtctgagtcactttttacccttcctaggcttg 495
Query: 297 tgggcgactagatgttacttgatttcttactcatttcctgcatcagtggggagccaccat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgggcgactagatgttacttgatttcttactcatttcctgcatcagtggggagccaccat 555
Query: 357 cctgtaggccaggcaagctgagagccagggatgtagagatggactctatattctgtgtca 416
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 556 cctgaaggccaggcaagctgagagccagggatgtagagatggactctatattctgtgcca 615
Query: 417 tcttgaatggcttataggacagtagaatgtgtgtgtgtgtggcgggnggg-ggggggg 473
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 616 tcttgaatggcttataggacagtagaatgtgtgtgtgtgtggcggg-gggtggggggg 672
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_h17.g1 MSMg01no484_h17.g1 CHROMAT_FILE:
MSMg01no484_h17.g1 PHD_FILE: MSMg01no484_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:04 2005
(664 letters)
>mm_chr2_27796920_27797983
Length = 1064
Score = 826 bits (427), Expect = 0.0
Identities = 460/471 (97%), Gaps = 2/471 (0%)
Strand = Plus / Minus
Query: 1 ccacaatgtcctcgttacatcatggaaaaggaagaaacacaggctctaaacatgcagggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ccacaatgtcctcgttacatcatggaaaaggaagaaacacaggctctaaacatgcagggc 611
Query: 61 tgggggttggtagctggcctcagggccacatcaggacccagcagtatcctgcagggatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tgggggttggtagctggcctcagggccacatcaggacccagcagtatcctgcagggatat 551
Query: 121 aggcaggaagcaagaaccccaagctagccttataacacccctgtaccccccactactcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aggcaggaagcaagaaccccaagctagccttataacacccctgtaccccccactactcaa 491
Query: 181 gagcacatcggaaggtctcaggcctgcagtccgggacactcctggcttcttggcataggc 240
||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 490 gagcacaccggaaggtctcaggcctgcagtccaggacactcctggcttcttggcataggc 431
Query: 241 agtaagttggaattgctcatgggcagcacctagaggcactgggttgctataaggatgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agtaagttggaattgctcatgggcagcacctagaggcactgggttgctataaggatgtca 371
Query: 301 gtgccagctgccctcccacaggtgagctctggctgtaggtacccaagaacaac-ggactg 359
||||||||||||||||||||||||||||||||| | |||||||||||| |||| || |||
Sbjct: 370 gtgccagctgccctcccacaggtgagctctggcagcaggtacccaagatcaactgg-ctg 312
Query: 360 aaatttgggattgggccatacataggttctctctagagagccaggctctctacccctgtg 419
|||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||
Sbjct: 311 aaatttgggattgggccatacataggttctctatggagagccagactctctacccctgtg 252
Query: 420 tagactcactggccatccagcctctcactgaggttcttttaatgtcatgtc 470
||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 251 tagactcactggccatccagcctctcactgaggctcttttaatgtcatgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space: 689316
Effective search space used: 689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
