MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-485A12
Chromosome	2 (Build37)
Map Location	76,122,350 - 76,122,588
singlet/doublet	singlet
Overlap gene	Pde11a
Upstream gene	LOC100040324, LOC667828, Hnrpa3, Nfe2l2, E030042O20Rik, LOC623453, Agps, Ttc30b, Ttc30a2, Ttc30a1
Downstream gene	Cyct, Drbp1, Osbpl6, Prkra, Dfnb59, Fkbp7, Plekha3, Ttn, 2610301F02Rik, Sestd1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040324 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC667828 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667828
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Hnrpa3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229279 MGI:1917171
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Nfe2l2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18024 MGI:108420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	E030042O20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320474 MGI:2444099
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	LOC623453 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623453
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 229 ESTs, 3 Proteins pseudo : _no_value

name	Agps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228061 MGI:2443065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc30b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72421 MGI:1919671
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc30a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:620631 MGI:3700200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc30a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78802 MGI:1926052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pde11a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241489 MGI:3036251
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyct (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13067 MGI:88579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Drbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241490 MGI:2387367
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Osbpl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99031 MGI:2139014
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prkra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23992 MGI:1344375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dfnb59 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381375 MGI:2685847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fkbp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14231 MGI:1336879
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plekha3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83435 MGI:1932515
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22138 MGI:98864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2610301F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545428 MGI:1919735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sestd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228071 MGI:1916262
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040324 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249836 GeneID:100040324
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001474502.1

name	Hnrpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37674276 GeneID:229279 MGI:1917171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A3 transcript_id : NM_198090.1

name	Hnrpa3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31559915 GeneID:229279 MGI:1917171
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heterogeneous nuclear ribonucleoprotein A3 transcript_id : NM_146130.2

name	Nfe2l2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76573877 GeneID:18024 MGI:108420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear factor, erythroid derived 2, like 2 transcript_id : NM_010902.3

name	E030042O20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149249851 GeneID:320474 MGI:2444099
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : RIKEN cDNA E030042O20 gene transcript_id : XM_001475569.1

name	Agps (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254235 GeneID:228061 MGI:2443065
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : alkylglycerone phosphate synthase transcript_id : NM_172666.2

name	Ttc30b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988382 GeneID:72421 MGI:1919671
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 30B transcript_id : NM_028235.1

name	Ttc30a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487006 GeneID:620631 MGI:3700200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 30A2 transcript_id : NM_001081228.1

name	Ttc30a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125988390 GeneID:78802 MGI:1926052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 30A1 transcript_id : NM_030188.3

name	Pde11a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486645 GeneID:241489 MGI:3036251
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphodiesterase 11A transcript_id : NM_001081033.1

name	Cyct (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116063576 GeneID:13067 MGI:88579
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome c, testis transcript_id : NM_009989.2

name	Drbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:91064873 GeneID:241490 MGI:2387367
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : developmentally regulated RNA binding protein 1 transcript_id : NM_153405.2

name	Osbpl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68131559 GeneID:99031 MGI:2139014
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxysterol binding protein-like 6 transcript_id : NM_145525.2

name	Prkra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130007 GeneID:23992 MGI:1344375
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase, interferon inducible double stranded RNA dependent activator transcript_id : NM_011871.2

name	Dfnb59 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123959713 GeneID:381375 MGI:2685847
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : deafness, autosomal recessive 59 (human) transcript_id : NM_001080711.1

name	Fkbp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6806908 GeneID:14231 MGI:1336879
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FK506 binding protein 7 transcript_id : NM_010222.1

name	Plekha3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560020 GeneID:83435 MGI:1932515
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 transcript_id : NM_031256.2

name	Ttn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77812698 GeneID:22138 MGI:98864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : titin transcript_id : NM_028004.2

name	Ttn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77812696 GeneID:22138 MGI:98864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : titin transcript_id : NM_011652.3

name	2610301F02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803212 GeneID:545428 MGI:1919735
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2610301F02 gene transcript_id : NM_001025576.2

name	Sestd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130274 GeneID:228071 MGI:1916262
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SEC14 and spectrin domains 1 transcript_id : NM_175465.3

name	LOC100040324 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249837 GeneID:100040324
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474552.1

name	Hnrpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37674277 CCDS:CCDS16149.1 GeneID:229279 MGI:1917171
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant a product : heterogeneous nuclear ribonucleoprotein A3 isoform a protein_id : NP_932758.1

name	Hnrpa3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559916 CCDS:CCDS16149.1 GeneID:229279 MGI:1917171
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant b product : heterogeneous nuclear ribonucleoprotein A3 isoform b protein_id : NP_666242.2

name	Nfe2l2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754832 CCDS:CCDS16150.1 GeneID:18024 MGI:108420
definition	GO_component : GO:0005737 - cytoplasm [Evidence IPI]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA] [Evidence IPI]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IDA]; GO:0030528 - transcription regulator activity [Evidence IGI]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045995 - regulation of embryonic development [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA]; GO:0006350 - transcription [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA] codon_start : 1 product : nuclear factor, erythroid derived 2, like 2 protein_id : NP_035032.1

name	E030042O20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149249852 GeneID:320474 MGI:2444099
definition	codon_start : 1 product : hypothetical protein LOC320474 protein_id : XP_001475619.1

name	Agps (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369960 CCDS:CCDS16151.1 GeneID:228061 MGI:2443065
definition	GO_component : GO:0005777 - peroxisome [Evidence ISS] [Evidence IEA] GO_function : GO:0008609 - alkylglycerone-phosphate synthase activity [Evidence IEA] [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0008610 - lipid biosynthesis [Evidence ISS] [Evidence IEA] codon_start : 1 product : alkyldihydroxyacetone phosphate synthase protein_id : NP_766254.1

name	Ttc30b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988383 GeneID:72421 MGI:1919671
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : novel tetratrico peptide repeat (TPR) containing protein product : tetratricopeptide repeat domain 30B protein_id : NP_082511.1

name	Ttc30a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487007 GeneID:620631 MGI:3700200
definition	codon_start : 1 note : novel tetratrico peptide repeat (TPR) containing protein product : tetratricopeptide repeat domain 30A2 protein_id : NP_001074697.1

name	Ttc30a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125988391 CCDS:CCDS16154.1 GeneID:78802 MGI:1926052
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 note : tetratricopeptide repeat domain 30A; novel tetratrico peptide repeat (TPR) containing protein product : tetratricopeptide repeat domain 30A1 protein_id : NP_084464.3

name	Pde11a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486646 GeneID:241489 MGI:3036251
definition	GO_function : GO:0004114 - 3',5'-cyclic-nucleotide phosphodiesterase activity [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : phosphodiesterase 11A protein_id : NP_001074502.1

name	Cyct (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753560 CCDS:CCDS16156.1 GeneID:13067 MGI:88579
definition	GO_component : GO:0005746 - mitochondrial electron transport chain [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IEA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : cytochrome c, testis protein_id : NP_034119.1

name	Drbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23510273 CCDS:CCDS16157.1 GeneID:241490 MGI:2387367
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence ISS] [Evidence IEA] codon_start : 1 note : dopamine receptor binding 1 product : developmentally regulated RNA binding protein 1 protein_id : NP_700454.1

name	Osbpl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:68131560 CCDS:CCDS16158.1 GeneID:99031 MGI:2139014
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] GO_process : GO:0006869 - lipid transport [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : OSBP-related protein 6 protein_id : NP_663500.2

name	Prkra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755162 CCDS:CCDS16159.1 GeneID:23992 MGI:1344375
definition	GO_component : GO:0005622 - intracellular [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IDA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006917 - induction of apoptosis [Evidence IDA]; GO:0042474 - middle ear morphogenesis [Evidence IMP]; GO:0042473 - outer ear morphogenesis [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006950 - response to stress [Evidence IDA]; GO:0048705 - skeletal morphogenesis [Evidence IMP] codon_start : 1 product : protein kinase, interferon inducible double stranded RNA dependent activator protein_id : NP_036001.1

name	Dfnb59 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123959714 GeneID:381375 MGI:2685847
definition	GO_component : GO:0043025 - cell soma [Evidence IDA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0007605 - sensory perception of sound [Evidence IMP] [Evidence IEA] codon_start : 1 note : pejvakin product : deafness, autosomal recessive 59 protein_id : NP_001074180.1

name	Fkbp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6806909 CCDS:CCDS16161.1 GeneID:14231 MGI:1336879
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : FK506 binding protein 7 (23 kDa) product : FK506 binding protein 7 protein_id : NP_034352.1

name	Plekha3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13752585 CCDS:CCDS16162.1 GeneID:83435 MGI:1932515
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008289 - lipid binding [Evidence IEA]; GO:0005545 - phosphatidylinositol binding [Evidence IDA] codon_start : 1 product : pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 protein_id : NP_112546.1

name	Ttn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77812699 GeneID:22138 MGI:98864
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0031430 - M line [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005859 - muscle myosin [Evidence TAS]; GO:0030017 - sarcomere [Evidence IDA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence TAS]; GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]; GO:0006278 - RNA-dependent DNA replication [Evidence IEA]; GO:0006938 - sarcomere alignment [Evidence TAS] codon_start : 1 note : isoform N2-B is encoded by transcript variant N2-B; connectin product : titin isoform N2-B protein_id : NP_082280.2

name	Ttn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77812697 GeneID:22138 MGI:98864
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0031430 - M line [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005859 - muscle myosin [Evidence TAS]; GO:0030017 - sarcomere [Evidence IDA]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0003964 - RNA-directed DNA polymerase activity [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence TAS]; GO:0005021 - vascular endothelial growth factor receptor activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]; GO:0006278 - RNA-dependent DNA replication [Evidence IEA]; GO:0006938 - sarcomere alignment [Evidence TAS] codon_start : 1 note : isoform N2-A is encoded by transcript variant N2-A; connectin product : titin isoform N2-A protein_id : NP_035782.3

name	2610301F02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701582 GeneID:545428 MGI:1919735
definition	codon_start : 1 product : hypothetical protein LOC545428 protein_id : NP_001020747.1

name	Sestd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425210 CCDS:CCDS16163.1 GeneID:228071 MGI:1916262
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : SEC14 and spectrin domains 1 protein_id : NP_780674.1

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 3 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 2 pseudo : _no_value

name	LOC667828 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667828
definition	number : 1 pseudo : _no_value

name	LOC623453 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249853 GeneID:623453
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 229 ESTs, 3 Proteins product : similar to proteolipid protein 2 pseudo : _no_value transcript_id : XR_032315.1

clone name	MSMg01-349A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307E11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399A05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-300E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-278N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-093I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389F23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-160E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-489D24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E23
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-485A12.T7 (MSMg01no485_a12.b1)	MSMg01-485A12.TJ (MSMg01no485_a12.g1)
ACC	AG564574	AG564575
length	727	1,495
length of high quality (start - end)	239 (79 - 317)	---
definition	CHROMAT_FILE: MSMg01no485_a12.b1 PHD_FILE: MSMg01no485_a12.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:06:49 2005	CHROMAT_FILE: MSMg01no485_a12.g1 PHD_FILE: MSMg01no485_a12.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:06:49 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	NAAATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGCGAAAAGCGC GGAATTCCAGCCTGGTTCCGCAAGAATTAATCATTTCAGCCACACACTGG CAAATGACTAGTTTGGTAATTCATGCTGGAGGTGCACATAAAGGAAGGCC ATGTAGAAGGGGTGGTTGGAATTTTCTGGTTCACTTCATGGGTTCCAATC AAAGGTTCCTGTGTTCCAGGGCTATGTATAAGCTATCTGAATTAGGTTCT ATGATTAGAGTCCTTCCATGCAATTAACTTATCCCTTTGTTATTCAAAGG GAGTAGAGGGAGACATTACNTTTGTTGGTAAAATTACGAGTTAGAGAGAA GCAAACCTTAGTGATCTATTAAGACTTTTGGGCTCCTTAGCATGACAACT GGGAAGTGACAGCGAGCATAGGTTCTTATCCATCCTTCTAGGCCATGGAT CCTTTGGTGGCAAAGGTGTTGCCTTTTGTCATATTGCATAAAGCAGAACA TGTCTATTGTCCAGAGGCAAATGTGAACAGTCTTGGCCTGACATCCTATT GTGGTTGGTGTTATGGAGTTTCTTAGCCTGTGGTCACCTCCTCTTAGTTC ATAATTCAGAGCGTTCAGTTATCCTGATACATTCATCTTACTGACATCTT TTGGAACTCGGATGCTGCTAACAGAACTCAGCTGCTGGGGACTGGCCATC TTCCAAAACTTGTTACTGGGAGTGCTG	TTGTTGTGTGTGGGTGGTTTGTGNGTGTGTTGTTCTCTTCTTGTGCTGTG GGNTGAGAGTTTTCTCTCCATAACGCGAGAGGCGCTGACGTGGAGTCTAT ATACACTCTTTATTACTCATACATACACTAAGTGTGTTGAACTGTTAATA TTTGNACAACAACTGTACATGACTTAGTAGTGCAGTGTGTCTCATCTGTT AGATATACATTAAATTGTGTAGGATTTTGGTCCATTCGCAGCCTGCTTTC CTCCCACGTTGCTGTGTTACGAGCCTCTGTGTCGTATCTAGTCGTGCGCG CAACGCGCACGTACACAAATAGATACGGACAACAGACAATGCTACACGCG GACGTGANTGTGTGAAGTGTGATGTTGAAGAGTTGCGCTCTCGCACCGCG CATCTGTGCGCACGAGCCACGATATATTGATGATCTAGAGACATGGGTGT GCGGTATGGGTGCTATCTAATGCCGCTATTAGTGTTATAGTTCAATCGAT AGCTATAGACTATCANTTATCACGCGCTGTACGTGTATATACACGCTCAA CCATTATACCGACTCATCCTCTATATACCTCTCGAACAANCATACGATTA TGNACNCCTCCGCTCANCTCTCTCTCGATACGTATTTCATTTACTACTGT CATCNTCTCACCGCTTCTCTGCTCTCATGTGTGAGTTTGCGCTTTGTATA ATATGTGCCGTTCTGCGCGGCGCTTCGCTCTTATATCACGCCACGAGACG AGGTATNCTCTCACCGGCCGCGTCATATGTTATGTGTANAGAATATGAGN AGAGGCACCAACGACTATCATATTAGTGGCATATGTNTAACCGCGTGTCG TCGTTGTGCGTTGCGAGTATGTATCGCGATTATATTCGTACTGCCGCGCA CGGTTGTCGCCTCATCTCGCACGACATCATCTAGCATCNCATTGCATTGT AGTCTATCTNCGCATGGCTATCGTGCGTCGCATTGAGTCGATGGATGGCC TGCGCATACGACAATCGTAATTGATCGTCTTTGATCGTCGATGGACACGT ATATCTGTCTATCGTGCATGTCTAGTGACGCACACCAGTCATTGATGACG ACTGTATAGNAANTGTTGCAGTGTCACGATCTGATGCANCTCCTATCTAG TATATATAGTATATATCAGCCATCGGCTGCAGTCACTACCTATCTACACT CTNATCGCTNAGTCNTGTNCGCACCTAGGAGNGAATANCGGTACGCGACT ATCAGCTGCATATAGTGTTAGTTGCGCGTCATGTTGCANAGCGTAGCACG TATGANGTNCTGACTCAGCTCGACCTGTGCAACGATACTCGTCTGCTCGT CATTCGCTGACACACGCTAGCCTCTTGGTCTCGAGTATCGTTCTGCGCGT GTACAGCACAATGACGTATGTACGCACGCACGCACACACCGCGCGTGTAC GTCTGTGNCTACGTGCTGGCGTNCGANACTATAGACAGAGCTCGG
quality values	Open. Hide. 0 3 6 6 6 8 8 8 8 14 14 16 27 29 33 32 30 28 28 37 37 30 26 23 30 25 31 36 21 21 10 9 9 19 23 9 9 9 9 9 9 6 6 7 7 6 6 8 8 9 12 22 22 28 28 33 31 37 37 37 19 15 6 6 6 6 7 7 8 10 10 8 8 8 8 11 10 13 15 21 27 37 44 48 53 53 53 53 53 53 53 53 53 53 53 53 53 53 53 53 53 53 53 68 68 68 68 68 68 68 68 68 68 68 57 44 44 32 39 39 43 39 39 37 39 36 36 28 38 40 57 68 68 68 68 68 68 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 54 54 57 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 34 44 32 36 25 25 25 24 27 25 48 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 50 50 47 47 27 27 11 6 3 0 3 7 7 9 7 7 13 15 19 36 47 50 50 50 50 53 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 68 68 59 59 47 31 31 20 32 32 48 57 57 68 68 57 57 57 57 54 57 57 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 59 59 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 57 50 50 53 50 50 50 57 59 57 57 57 48 48 48 57 53 48 48 48 42 42 47 47 44 39 39 37 37 39 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 43 35 31 34 40 41 41 47 47 47 59 59 59 59 47 47 41 41 34 34 25 24 24 39 34 41 43 59 47 43 41 37 37 41 41 41 41 44 41 26 19 17 17 17 21 29 33 33 33 37 46 47 50 59 59 59 37 27 20 19 19 18 22 18 22 22 29 37 31 30 25 29 32 37 37 37 39 39 34 30 24 24 28 26 32 35 33 27 31 34 28 32 27 31 37 37 37 41 34 21 15 10 10 15 19 21 41 35 27 26 26 17 24 15 15 13 18 18 22 18 22 32 28 20 20 18 24 24 29 37 34 34 28 25 25 30 28 27 29 32 37 37 39 35 32 34 30 30 30 30 28 28 33 34 31 31 30 25 18 18 21 21 29 32 36 26 30 14 15 17 29 26 22 22 19 14 10 11 11 9 8 9 12 12 15 15 15 20 32 23 32 20 12 12 15 15 9 12 10 15 15 19 13 18 18 30 23 9 9 9 9 7 9 6 8 9 16 12 11 15 19 19 15 11 10 10 10 11 11 15 19 15 12	Open. Hide. 6 6 6 7 6 6 6 6 6 6 6 9 9 10 9 9 9 10 6 8 6 6 3 0 3 8 8 10 8 8 8 8 10 10 11 10 10 8 8 8 8 8 8 8 7 6 6 6 8 8 8 3 0 3 6 6 6 6 6 6 6 7 8 8 8 8 8 8 8 8 10 10 10 8 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 9 8 8 6 6 8 8 8 6 7 8 12 8 6 6 8 6 6 7 6 6 6 6 8 8 8 8 7 7 8 8 10 10 10 10 6 6 6 6 8 8 9 9 9 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 10 8 3 0 3 6 8 8 8 8 8 6 6 6 6 8 8 8 8 8 6 6 6 6 6 6 8 6 6 8 6 6 6 8 10 13 13 11 10 10 10 13 10 10 6 6 6 7 8 6 9 11 10 11 8 8 7 6 8 8 10 10 10 10 10 8 8 6 6 6 6 10 10 10 8 8 8 8 6 6 6 6 6 8 8 11 11 8 6 6 6 6 6 8 6 6 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 6 6 6 8 6 9 10 10 10 8 9 9 8 8 8 9 9 9 10 10 10 10 8 8 8 8 8 8 9 8 8 8 8 10 10 11 12 12 11 11 10 11 10 10 10 9 11 10 11 11 11 6 8 6 6 6 6 8 8 6 6 6 6 8 8 6 6 6 8 6 8 8 8 8 8 8 8 6 6 6 6 8 6 6 6 6 10 8 8 8 8 8 10 10 3 0 3 8 9 8 8 8 8 8 8 8 11 8 8 8 8 8 8 8 6 6 6 6 6 6 6 6 6 8 9 9 9 9 9 10 9 8 8 10 11 11 8 8 8 10 8 8 8 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 7 8 8 6 6 6 10 8 6 6 8 6 8 8 8 6 6 6 6 7 8 8 8 8 8 8 8 8 8 10 10 8 8 8 8 8 8 10 8 6 6 6 10 6 8 8 8 7 10 9 6 8 6 6 6 10 8 9 9 9 9 8 8 6 6 6 8 8 8 8 10 8 8 10 10 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 3 0 3 6 6 6 8 10 14 10 8 8 8 8 8 8 8 8 8 11 10 10 8 10 8 8 8 8 8 8 8 8 8 8 6 6 6 8 6 8 10 10 11 8 6 6 6 6 6 6 6 8 10 8 8 8 8 6 6 6 6 6 7 6 6 8 8 8 8 8 8 6 7 7 3 0 3 10 8 6 6 8 6 7 7 8 10 3 0 3 3 0 3 6 6 6 8 8 12 9 6 3 0 3 10 11 12 8 6 6 8 15 10 8 8 6 6 6 6 6 6 13 8 8 8 6 6 6 6 8 8 6 6 8 12 9 8 8 6 3 0 3 8 8 6 6 6 7 6 8 6 8 8 7 8 8 8 11 11 18 9 9 9 9 9 8 8 8 8 8 8 8 8 11 8 8 8 8 8 8 8 8 10 10 11 8 8 6 7 12 13 9 10 9 8 6 6 7 7 8 10 9 9 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 8 10 8 8 8 8 8 8 6 6 6 6 10 6 6 6 8 12 3 0 3 9 6 6 6 7 6 6 6 6 6 10 6 9 8 10 8 8 8 8 8 8 8 8 8 8 6 6 6 6 3 0 3 6 6 10 8 6 6 8 8 3 0 3 8 8 9 10 10 10 11 8 10 8 8 8 8 6 6 7 11 7 8 9 9 9 9 9 9 6 6 6 6 6 6 8 8 8 3 0 3 10 9 9 9 9 9 9 8 8 8 8 8 6 8 6 6 6 6 6 6 9 10 9 8 8 8 8 8 8 13 12 9 8 10 8 6 6 8 8 8 8 8 8 12 10 9 8 8 8 8 9 9 6 6 6 6 10 8 9 10 10 9 8 8 8 10 8 6 8 10 8 8 8 10 6 6 6 8 8 6 6 6 6 6 6 6 6 8 6 6 12 8 8 8 6 6 8 8 10 3 0 3 8 7 10 6 6 6 6 8 10 8 8 8 11 8 10 10 9 9 3 0 3 8 6 8 6 6 12 12 13 8 8 8 7 7 10 10 10 10 9 7 7 8 6 8 6 8 6 8 8 8 8 6 6 6 6 6 8 6 6 6 6 8 8 8 10 9 8 8 8 8 8 8 8 8 8 10 9 9 9 9 7 7 6 6 6 6 8 8 6 6 6 6 6 6 10 8 8 8 8 6 6 6 6 8 8 8 10 12 10 10 8 13 8 8 8 8 9 10 10 10 8 11 8 8 6 8 8 6 6 10 10 8 6 6 6 6 8 6 8 9 8 8 8 8 6 8 6 6 10 6 8 8 8 10 10 8 8 8 8 8 8 8 8 9 9 10 8 8 3 0 3 3 0 3 13 11 9 8 8 6 6 8 10 6 6 6 6 9 11 9 8 6 6 6 6 8 8 3 0 3 10 9 9 9 9 10 10 10 9 8 6 8 6 7 6 6 8 8 6 6 13 8 8 8 8 8 8 8 8 8 8 10 10 8 9 9 9 9 9 9 9 9 8 6 6 6 6 6 6 10 10 11 11 10 8 6 6 6 6 8 8 3 0 3 8 10 11 10 3 0 3 6 8 3 0 3 10 3 0 3 8 8 8 8 8 10 8 8 8 7 3 0 3 6 7 6 3 0 3 8 8 10 10 9 9 9 9 9 8 8 8 8 8 8 9 8 6 6 6 6 6 6 6 6 6 8 8 12 10 10 8 7 6 6 8 8 9 9 8 10 6 6 8 8 6 6 6 3 0 3 12 12 17 15 11 8 8 8 7 8 9 9 9 11 3 0 3 3 0 3 8 8 8 8 8 6 6 7 6 11 8 10 8 8 9 10 8 8 8 6 6 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 6 6 6 6 6 6 7 7 7 8 8 10 11 11 10 9 9 9 8 8 6 6 8 6 10 10 6 6 6 6 6 6 8 14 9 8 6 6 6 6 6 6 9 11 11 14 8 8 8 6 6 6 6 6 6 8 7 9 7 8 10 10 10 15 16 16 15 13 12 18 12 17 15 15 10 10 10 10 8 8 8 8 7 8 6 6 6 6 6 6 8 10 8 6 6 8 10 8 8 8 8 10 11 3 0 3 8 8 8 8 8 6 6 6 6 6 7 7 3 0 3 6 3 0 3 8 7 8 10 9 9 10 10 10 10 9 9 9 9 9 9 9

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no485_a12.b1 MSMg01no485_a12.b1 CHROMAT_FILE:
MSMg01no485_a12.b1 PHD_FILE: MSMg01no485_a12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:49 2005
         (239 letters)



>mm_chr2_76122150_76122788
          Length = 639

 Score =  462 bits (239), Expect = e-135
 Identities = 239/239 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatcatttcagccacacactggcaaatgactagtttggtaattcatgctggaggtgcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aatcatttcagccacacactggcaaatgactagtttggtaattcatgctggaggtgcaca 380

                                                                       
Query: 61  taaaggaaggccatgtagaaggggtggttggaattttctggttcacttcatgggttccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 taaaggaaggccatgtagaaggggtggttggaattttctggttcacttcatgggttccaa 320

                                                                       
Query: 121 tcaaaggttcctgtgttccagggctatgtataagctatctgaattaggttctatgattag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcaaaggttcctgtgttccagggctatgtataagctatctgaattaggttctatgattag 260

                                                                      
Query: 181 agtccttccatgcaattaacttatccctttgttattcaaagggagtagagggagacatt 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 agtccttccatgcaattaacttatccctttgttattcaaagggagtagagggagacatt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space:   144900
Effective search space used:   144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information