Query= MSMg01no485_o22.b1 MSMg01no485_o22.b1 CHROMAT_FILE:
MSMg01no485_o22.b1 PHD_FILE: MSMg01no485_o22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:04 2005
(695 letters)
>mm_chr2_38434547_38435641
Length = 1095
Score = 1288 bits (666), Expect = 0.0
Identities = 678/682 (99%)
Strand = Plus / Minus
Query: 14 gaattctcaatggttttacttaagcaggaagcagaaaaggcagtggtggggggaggagag 73
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 gaattctcaatggtttaagttaagcaggaagcagaaaaggcagtggtggggggaggagag 836
Query: 74 agttttgtcctagctctttaagctgatatcaggagaagacaccacaggtggtctcaggga 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 agttttgtcctagctctttaagctgatatcaggagaagacaccacaggtggtctcaggga 776
Query: 134 ggtggcagccatgactgcaggacacctcttgccaattacccagtgctgggcccagatgag 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ggtggcagccatgactgcaggacacctcttgccaattacccagtgctgggcccagatgag 716
Query: 194 gcccctccttgtctgctgggaaaatatacacttctttccctgatgcactgcaggggtgca 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gcccctccttgtctgctgggaaaatatacacttctttccctgatgcactgcaggggtgca 656
Query: 254 gaggggtgccagtttcaacagagcctactgtcacccttgagggcagcccatgaatggcca 313
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 655 gaggggtgccagtttcaacagagcccactgtcacccttgagggcagcccatgaatggcca 596
Query: 314 tggccgccttttgtcctgtccttgtgggcgaatattcctagaggactgattgatttattt 373
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tggctgccttttgtcctgtccttgtgggcgaatattcctagaggactgattgatttattt 536
Query: 374 ggcttcccactgccttttgctcctgcatagctacaaggcactcagcgacacactgccaac 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ggcttcccactgccttttgctcctgcatagctacaaggcactcagcgacacactgccaac 476
Query: 434 aactagatcaactgactaagctgagccctgccgccacgctggaagccacctcctcaggta 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aactagatcaactgactaagctgagccctgccgccacgctggaagccacctcctcaggta 416
Query: 494 tgtgtgtaggacttagaacagcctgcttggctgggaatccatcgaggctatggtcgtggg 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tgtgtgtaggacttagaacagcctgcttggctgggaatccatcgaggctatggtcgtggg 356
Query: 554 cttggtgcagaccaagactgggctgcgtttgccactaaggagctgtaacaaaggcttgga 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cttggtgcagaccaagactgggctgcgtttgccactaaggagctgtaacaaaggcttgga 296
Query: 614 cagggaccagggctggcaggaacagagggagccagctgtcatcttccatcggccctgggg 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cagggaccagggctggcaggaacagagggagccagctgtcatcttccatcggccctgggg 236
Query: 674 gatgcacagagctcttctctca 695
||||||||||||||||||||||
Sbjct: 235 gatgcacagagctcttctctca 214
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no485_o22.g1 MSMg01no485_o22.g1 CHROMAT_FILE:
MSMg01no485_o22.g1 PHD_FILE: MSMg01no485_o22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:04 2005
(675 letters)
>mm_chr2_38277898_38278972
Length = 1075
Score = 1222 bits (632), Expect = 0.0
Identities = 665/676 (98%), Gaps = 2/676 (0%)
Strand = Plus / Plus
Query: 1 ttcctgtttgggagtgatgcattctgaacattctatgcagatgtgacatagcccaaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcctgtttgggagtgatgcattctgaacattctatgcagatgtgacatagcccaaggct 260
Query: 61 tggggaggattcctgaaagggagaggaaatccactctgtaggttcagggaaggtgaagat 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggaggatgcctgaaagggagaggaaatccactctgtaggttcagggaaggtgaagat 320
Query: 121 agggcttgctgcgccactccagagagatggataatgaaactgagagtaaatgtttagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agggcttgctgcgccactccagagagatggataatgaaactgagagtaaatgtttagcaa 380
Query: 181 attgacaggtgacgttcttttgtttgttgatttttaaagaagcagggctgtgtttgtcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgacaggtgacgttcttttgtttgttgatttttaaagaagcagggctgtgtttgtcac 440
Query: 241 caatgttcacagttttatccatgatgtagaaaccatccagatgtcccagtatagacagac 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatgttcacagcagtatccatgatgtagaaaccatccagatgtcccagtatagacagac 500
Query: 301 aggatacacacagtgtgctt-ggggaataacatttagccttggaaaagagtgaagccatg 359
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 aggatacacacagtgtgcttagggga-taacatttagccttggaaaagagtgaagccatg 559
Query: 360 tcattcttatgcacgccctttgaaagcacttcgttaaaggaaaaaagttggacccgaaag 419
|||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 560 tcattcttatgcacaccctttgaaagcacttcgttaaaggaaagaagttggacccgaaag 619
Query: 420 ggtcagcatggtatggcttcagtcaggtaagaaacctacaatggtcacatcatagacaga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggtcagcatggtatggcttcagtcaggtaagaaacctacaatggtcacatcatagacaga 679
Query: 480 agcagaatagtggtaacccagtgggaggagagcagagaactagcgtttaaccgtgaggtg 539
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 agtagaatagcggtaacccagtgggaggagagcagagaactagcgtttaaccgtgaggtg 739
Query: 540 tcacgcagcccctagcaaatccatgcacgggtgctcatcacccactaaacatccttcttg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tcacgcagcccctagcaaatccatgcacgggtgctcatcacccactaaacatccttcttg 799
Query: 600 cttcctaccatgagtcacccatcccaactttgcatcttgtctccaccaacctgtatctgt 659
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cttcttaccatgagtcacccatcccaactttgcatcttgtctccaccaacctgtatctgt 859
Query: 660 cccacccccagccctg 675
||||||||||||||||
Sbjct: 860 cccacccccagccctg 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
