NTGCACCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGAT
CCGCGGAATTCACTCTGTATTCCCGGTTACAGGTCACTCAGAGACCCACC
TGCCTCTGCCTCTTGAGTGCTGGGATTAGAGGCTTGTACAATCACCGCCA
GGCTCCCTCCTTCTATTTTGATTTTTGGTTTTGTTTTTGAGACGGAGGTT
TGAAATGTGGCCCATGTTGACCTCAAAGTCATAGTGAACCTCCAGCCTCA
GCCACCTGAGTCCTGGGATTATGGGTGTGCACCACAGTGCCCAGCCAGCT
TTACATCATTAATGGTATTTTTCCAAACTTCAGTATGACATCATTTATTT
GCTTATAATCTAAACCAGACTTTTTAAACTCATGGTAGGATAAGAATTAA
AATATAAATAATAATAAACAGCTTTTCCCTCTATTTTTAAAACTATTTAA
ATTTATTTATGAGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTCCCA
TGGTGCTTGGGTAGAGAGGAGCAGCGGACAAGTAATAGGAGTTGGGCTTC
CTCCCACATGTATGTCTTGGCACTTGAATTCCAGTTTGCCCATGCCTTTT
ACCCCCTATGCCTATCTCTTTGGCTCCTCCATAACCTTTTTAAAAGTTAT
GCCCTTGATAACACGCCCTTTTAACGTAAAACCCAATCTCTTATATTCCT
CCCCTTGCCTCTTTCGATCTTTATTCAAACCATATATTTTTTCATATAAG
GTAAGGCTTATACTTTGTTGTTCTCTTCG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCACAGAAATTAGGAAACAAGCAAGGGATCA
TGGGGGATGGAGGATCTTTCAAAGGAGGAGACATGGAATGCAGTAATATA
AAGGAGGTAAAATGAATAATGGAACAGGAAGAATTAAATGGGACAGAGCA
TGTGAGGGCAAGTTAGAGGGGGGCTATGGGGAAGGATAATGAACACTATA
AAAACTTCTTCAAACAGTCATGTAAGAATCTGCTACTGAGAAAGAAGAAA
AGTGTGGAGAGGCCATGTGTAGACACCAAGAGGATTTGCCATGAGGTCTC
CATGTAAGAGCAGCTATGAGCACACACACGAAGCAAAGAAAGCCAGAGCA
AGACTCAGATGACCAGCACCAGGGCATTTATCTGAGTATTAACAACTTAG
AAGATAGAATAACTCAGAACCTTACCAGCATAGTGCCAGCAACTTGTTAA
TAAAAATTTTTTACATAATAAACAATAAAATAACAATCTGCTACTGAAGT
TTCCTAAAATGTATGCATATATACACATAAAAGTAGTTTAAATGAAGTTA
TTCTACAACATGCGAACAATTATCCCTACTAAACACTACATGTTAGCAAA
CCTAGTACCAGGAATATGTTCCCCTTTTTTTAGTTTGGCCAGTTGGGTCC
CAGAGACCCCCAAACATTACAGGCTATTGCCAATGATGTGGATTAACTTC
CATAAATTCATTGG

Query= MSMg01no486_k19.g1 MSMg01no486_k19.g1 CHROMAT_FILE:
MSMg01no486_k19.g1 PHD_FILE: MSMg01no486_k19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:03 2005
         (446 letters)



>mm_chr2_80567287_80568128
          Length = 842

 Score =  808 bits (418), Expect = 0.0
 Identities = 436/444 (98%), Gaps = 4/444 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcacagaaattaggaaacaagcaagggatcatgggggatggaggatctttcaaaggagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tcacagaaattaggaaacaagcaagggatcatgggggatggaggatctttcaaaggagga 581

                                                                       
Query: 61  gacatggaatgcagtaatataaaggaggtaaaatgaataatggaacaggaagaattaaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gacatggaatgcagtaatataaaggaggtaaaatgaataatggaacaggaagaattaaat 521

                                                                       
Query: 121 gggacagagcatgtgagggcaagttagaggggggctatggggaaggataatgaacactat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gggacagagcatgtgagggcaagttagaggggggctatggggaaggataatgaacactat 461

                                                                       
Query: 181 aaaaacttcttcaaacagtcatgtaagaatctgctactgagaaagaagaaaagtgtggag 240
           |||||||||||    |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaaaacttctt----cagtcatgtaagaatctgctactgagaaagaagaaaagtgtggag 405

                                                                       
Query: 241 aggccatgtgtagacaccaagaggatttgccatgaggtctccatgtaagagcagctatga 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aggccatgtggagacaccaagaggatttgccatgaggtctccatgtaagagcagctatga 345

                                                                       
Query: 301 gcacacacacgaagcaaagaaagccagagcaagactcagatgaccagcaccagggcattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 344 gcacacacacgaagcaaagaaagccagagcaagactcagatgaccagtaacagggcattt 285

                                                                       
Query: 361 atctgagtattaacaacttagaagatagaataactcagaaccttaccagcatagtgccag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 atctgagtattaacaacttagaagatagaataactcagaaccttaccagcatagtgccag 225

                                   
Query: 421 caacttgttaataaaaatttttta 444
           ||||||||||||||||| ||||||
Sbjct: 224 caacttgttaataaaaaattttta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 842
Length adjustment: 10
Effective length of query: 436
Effective length of database: 832
Effective search space:   362752
Effective search space used:   362752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)