Query= MSMg01no487_a10.b1 MSMg01no487_a10.b1 CHROMAT_FILE:
MSMg01no487_a10.b1 PHD_FILE: MSMg01no487_a10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:30 2005
(659 letters)
>mm_chr2_65263480_65264540
Length = 1061
Score = 1236 bits (639), Expect = 0.0
Identities = 655/661 (99%), Gaps = 4/661 (0%)
Strand = Plus / Plus
Query: 1 gtcagatgacggtatgaaaatgtgttattttatctcatgctttagatgatcaactacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcagatgacggtatgaaaatgtgttattttatctcatgctttagatgatcaactacagt 260
Query: 61 gattaaaaagaacttgatcagtgcacagatttgcacattggctttcctaagagaaatcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattaaaaagaacttgatcagtgcacagatttgcacattggctttcctaagagaaatcat 320
Query: 121 gcaatagtggatggtggttggaaacctatagtttaagccattcattctattgatcacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcaatagtggatggtggttggaaacctatagtttaagccattcattctattgatcacttt 380
Query: 181 ttttt-aagtactttaaactcaaactcagccatgttcagaagctctcctgagcttgagag 239
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttttaagtactttaaactcaaactcagccatgttcagaagctctcctgagcttgagag 440
Query: 240 ccaccttgtacttctgatccctttttattagacagcaatgtttaccgaagtgattattaa 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaccttgaacttctgatccctttttattagacagcaatgtttaccgaagtgattattaa 500
Query: 300 aatcaacaaaaaatacaaagctatggcaaccagaatttagtgcttttagatgcctgtgtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatcaacaaaaaatacaaagctatggcaaccagaatttagtgcttttagatgcctgtgtt 560
Query: 360 ggttgtctctaccctatggctatgacttagtcatgcagtatttcttgtaggatcttaatg 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggttgtctctaccctatggctataacttagtcatgcagtatttcttgtaggatcttaatg 620
Query: 420 gacatctgaaacttgcccagcccttcctgagttactgctaaatattaggcatcagaattt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacatctgaaacttgcccagcccttcctgagttactgctaaatattaggcatcagaattt 680
Query: 480 tgatttatggacttatgactgattacgcagttaacaacaacaatttagctaaagaaagga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgatttatggacttatgactgattacgcagttaacaacaacaatttagctaaagaaagga 740
Query: 540 attaataaagtaccttttaaaatgtttttaatgcttaatccgggtt-gaacatgaaaaca 598
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 attaataaagtaccttttaaaatgtttttaatgcttaatccgggtttgaacatgaaaaca 800
Query: 599 aaa--gtcttttgccacagaccgggcccagtcagcccccctcaatccgtgggaatcaggg 656
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaatagtcttttgccacagaccgggcccagtcagcccccctcaatccgtgggaatcaggg 860
Query: 657 t 657
|
Sbjct: 861 t 861
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1061
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1051
Effective search space: 682099
Effective search space used: 682099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_a10.g1 MSMg01no487_a10.g1 CHROMAT_FILE:
MSMg01no487_a10.g1 PHD_FILE: MSMg01no487_a10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:30 2005
(382 letters)
>mm_chr2_65328187_65328968
Length = 782
Score = 712 bits (368), Expect = 0.0
Identities = 377/380 (99%)
Strand = Plus / Minus
Query: 2 gaggctggcccagctgttctctgctgaagcgtgtgacacatcacagcatggtcaggcgac 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gaggctggcccagctgttctctgctgaagcgtgtgacacatcacagcatggtcaggcgac 477
Query: 62 atgggcagtcccaacatcatgtttaattctgctgatgggctttccactttagtcttttag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 atgggcagtcccaacatcatgtttaattctgctgatgggctttccactttagtcttttag 417
Query: 122 ttttcaaaacagaaataattgcatgcccgatgagatttaccacaatataaattttaaaca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ttttcaaaacagaaataattgcatgcccgatgagatttaccacaatataaattttaaaca 357
Query: 182 taccagcaattcgatataatcagagacttatgagagcatgcacatttttaatttctgttt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 taccagcaattcgatataatcagagacttatgagagcatgcacatttttaatttctgttt 297
Query: 242 ttatttcattaaaataagaccacagctttttttttgttattgatgattcagcccttatat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttatttcattaaaataagaccacagctttttttttgttattgatgattcagcccttatat 237
Query: 302 gtaaactgtgccaccaaaataagcttcaagagatttgtgtgtgtgtgtatgtgtgtgtgt 361
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 236 gtaaactgtgccaccaaaataagcttcaagagatttgtgtgtatgtgcgtgtgtgtgtgt 177
Query: 362 gtgtgtgtgtgtgtgtgtgt 381
||||||||||||||||||||
Sbjct: 176 gtgtgtgtgtgtgtgtgtgt 157
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
