NCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAAATTCTTCTGGAAAGGCAAAAAAACAGAATAGCAAAAACAGT
ATTTAGTAAAAGAACTGCTGGGGGAATCATCATCCATGACCTCAAGCTTT
ATTACAAAGCAATAGTGACTAAAAACCTGCATGGTGTTGGTACAGAGACA
GACACGTTGATCAATGGAATAGAATTGAAGACCCAGAAATAAACACACAC
TTACATGCACTTGATCTTTGACAATGAAGTCAAAAATATACAATGGAAAA
AAAGAAAGCATCTTCAACAAATGGTGCTGGTCTAACTGGCTGTTGATATT
TAGAAAAAATGAAAATAGACCCATATTTGTCACATTGCACAAAGCTTAAG
TCTAAGTGGATCAAGCACTTCAACATAAAACCTGATGCACTGAATTTAAT
AAAAGAGAAATTAGGAAAGAGCCTTGAACTCATTGTTATAGGGGGACATT
TCCTAAAGAGAACTCCAATGACTCACGCTCTAAGATCAAGAATTGACAAG
TGGGACCTCATGAAACTGGAAAGCTGCTGTAAGGCAAAGGACATAGTCAA
TAAGACAAATCAGGAACCTAGAGATTGGGAAAAATTTATAAACCCCACAT
GNCACAGAGGGCTAATATCTGAAATACNTAAAGAACTAAAGAAACTAACC
ACCAAAAACCCAACCAAACCAACCCAACCAACCAAAACAAAACACACTCT
TGGTGCGCGCCCCCAACTCGNNCAGCAGAACAACN

ATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAAGGAAACAGAAGTCTGGTCAGAGGGGA
GAGTTACTGGAGTTTTCTAGCTTTCAGGCCATCTCCAGGTTCAAGAAGAG
ATTTTTGTCTCCAGGATGTAAAACAGTGATAGATCAGGACACTTGACATA
TTCTATTGGTCTCCCACATATACATACATGCATGTGTACATATACACACA
CTCAAACACACTTATACATTCACTCACACATACACACACACACACACACA
CACACACACACATGAATGCAGGTTCTCACACAAACTACACACTCAGATAT
ATACATGATTAATTATACAATTAAAAATTAAAGCAATAATATTTAAGCAA
TAAAACTTATTTTATTGTTACTTTTCACCTCATTGTTAGGGTGCAAAATA
TGCTTGGCTTTGAATGGCTCTTCATAAGGGTGCTAGATTTTTATGCTTAT
ACAGCAAGTACTCTTATTTCTATTTGTTATTTCTCCACACCTATATATTA
TACATTTTGAATTCTACATATATATGTATATATGTAAATGCATATATATA
CATACATATATATATGTTGTACTGAGACCACAATGGTTAGTCAACAGTGA
TTTAATTCTCTTTATTCAAGTGCTTTCCCCTACTGAAACCAATATTATTT
GGCCATGAGGATATAACTCTCCACTGTCGTACAAGTGTAGTCCATATGTT
TGGAAAGTATGAATAAGAACTCATTTCN

Query= MSMg01no487_b23.g1 MSMg01no487_b23.g1 CHROMAT_FILE:
MSMg01no487_b23.g1 PHD_FILE: MSMg01no487_b23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:09:38 2005
         (652 letters)



>mm_chr2_99916097_99917149
          Length = 1053

 Score = 1178 bits (609), Expect = 0.0
 Identities = 645/661 (97%), Gaps = 9/661 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaggaaacagaagtctggtcagaggggagagttactggagttttctagctttcaggccat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 935 aaggaaacagaagtctggtcagaggggagagttactggagttttctagctttcaggccat 876

                                                                       
Query: 61  ctccaggttcaagaagagatttttgtctccaggatgtaaaacagtgatagatcaggacac 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 875 ctccaggttcaagaagagatttttgtctccaggatgtaaaacagtaatagatcaggacac 816

                                                                       
Query: 121 ttgacatattctattggtctcccacatatacatacatgcatgtgtacatatacacacact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ttgacatattctattggtctcccacatatacatacatgcatgtgtacatatacacacact 756

                                                                       
Query: 181 caaacacacttatacattcactcacacatacacaca--cacacacacacacacacacaca 238
           ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 755 caaacacacttatacattcactcacacatacacacaaacacacacacacacacacacaca 696

                                                                       
Query: 239 catgaatgcaggttctcacacaaactacacactcagatatatacatgattaattatacaa 298
           ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 catgaatgcaggcacacacacaaactacacactcagatatatacatgattaattatacaa 636

                                                                       
Query: 299 ttaaaaattaaagcaataatatttaagcaataaaacttattttattgttacttttcacct 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ttaaaaattaaagcaataatatttaagcaataaaacttattttattgttacttttcacct 576

                                                                       
Query: 359 cattgtt-agggtgcaaaatatgcttggctttgaatggctcttcataagggtgctagatt 417
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 cattgtttagggtgcaaaatatgcttggctttgaatggctcttcataagggtgctagatt 516

                                                                       
Query: 418 tttatgcttatacagcaagtactcttatttctatttgttatttctccacacctatatatt 477
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 515 tttatgcttatacagcaagtactcttatttctatttgctatttctccacacctatatatt 456

                                                                       
Query: 478 atacattttgaattctacatatatatgtatatatgtaaatgcatatatatacatacatat 537
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 455 atacattttgaattctacatatatatgtatatatgtaaatacatatatatacatacatat 396

                                                                       
Query: 538 atatat------gttgtactgagaccacaatggttagtcaacagtgatttaattctcttt 591
           ||||||      ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atatatatatatgttgtactgagaccacaatggttagtcaacagtgatttaattctcttt 336

                                                                       
Query: 592 attcaagtgctttcccctactgaaaccaatattatttggccatgaggatataactctcca 651
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 attcaagtgctctcccctactgaaaccaatattatttggccatgaggatataactctcca 276

            
Query: 652 c 652
           |
Sbjct: 275 c 275


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1053
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1043
Effective search space:   669606
Effective search space used:   669606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)