Query= MSMg01no487_o07.b1 MSMg01no487_o07.b1 CHROMAT_FILE:
MSMg01no487_o07.b1 PHD_FILE: MSMg01no487_o07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:38 2005
(649 letters)
>mm_chr2_76034949_76035998
Length = 1050
Score = 1197 bits (619), Expect = 0.0
Identities = 644/655 (98%), Gaps = 6/655 (0%)
Strand = Plus / Minus
Query: 1 caggtttagtgtatgcagagctaaagatccaacccagggcttcatgttaggcaagttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 caggtttagtgtatgcagagctaaagatccaacccagggcttcatgttaggcaagttctc 812
Query: 61 tacaaaccaaacaacagtctccagcccttgcccttggtttttgtttgttttgtttttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tacaaaccaaacaacagtctccagcccttgcccttggtttttgtttgttttgtttttctt 752
Query: 121 tatttatttcctttggga-----tgttttgttttgttttgggagttgttgtttttcagct 175
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 751 tatttatttcctttgggatgttttgttttgttttgttttgggggttgttgtttttcagct 692
Query: 176 tgttttcattttaatatttttaaatgctcatcatttatattttaagaatcaaatattctc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tgttttcattttaatatttttaaatgctcatcatttatattttaagaatcaaatattctc 632
Query: 236 aagttctatcaagagtatttatatgtcttatattctttgtgatcctatgcctatgcactt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aagttctatcaagagtatttatatgtcttatattctttgtgatcctatgcctatgcactt 572
Query: 296 atagcttaaaatttctcattctatcttataaaatgcttccagatagaaaatacactttta 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 atagcttaaaatttctcattctatcttataaaatgcttccagatagaaaatacactttta 512
Query: 356 aaatatcttaattctctttattcttgggacattctctgggactgattcttaacgtgtaaa 415
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 511 aaatatcttaattctctttattcttgggacattctctgggactgattcttaaagtgtaaa 452
Query: 416 accagtgcatacttacatgcacatgcacacacacacacgggggtggggg-tactataatt 474
|| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct: 451 actagtgcatacttacatgcacatgcacgcacacacacggggggggggggtactataatt 392
Query: 475 acaaataaaaatacttttaaaaagccctaacttcccatggaaggagttacagagacaaag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 acaaataaaaatacttttaaaaagccctaacttcccatggaaggagttacagagacaaag 332
Query: 535 tttggagctgagacaaaaggatggaccatctagagactgctgcaccaggggatccatccc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tttggagctgagacaaaaggatggaccatctagagactgctgcaccaggggatccatccc 272
Query: 595 ataatcaacctccaaatgcagacaccattgcatacaccagcaagattttgctgaa 649
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ataatcaacctccaaatgcagacaccattgcatacaccagcaagattttgctgaa 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no487_o07.g1 MSMg01no487_o07.g1 CHROMAT_FILE:
MSMg01no487_o07.g1 PHD_FILE: MSMg01no487_o07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:38 2005
(652 letters)
>mm_chr2_76028938_76029988
Length = 1051
Score = 1154 bits (597), Expect = 0.0
Identities = 636/649 (97%), Gaps = 1/649 (0%)
Strand = Plus / Plus
Query: 1 gtcctgtttgttccttgactactttctttaggtcttaaggactgaacatattctttgtat 60
|||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 201 gtcctgcttgttccttgactactttgtttaggtcttaaggactgaacattttctttgtat 260
Query: 61 atacctagaatgatataaaagcagactggaaaaaattaaactcatcttcagcttcagaac 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atacctagaatgatataaaaacagactggaaaaaattaaactcatcttcagcttcagaac 320
Query: 121 tgactggggtcatgttatgagttattgtgttgtctaattgtctttttctttttaaccctc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tgactggggtcatgttatgagttattgtgttgtctaattgtctttttcttttcaaccctc 380
Query: 181 catccctccctggagaatccgttgactgactgagctggcttggtcaatgagtcagtggta 240
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 catccctccctggagaatccattgactgactgagctggcttggtcaatgagtcagcggta 440
Query: 241 aaacttatttgtttagaaaaaaaaaaaggtctctaagaatcagcaagcttcaaactggag 300
|||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 aaacttatttgtttagtaaaaaaaaa-ggtctctaagaatcagcaagcttcaaactggag 499
Query: 301 ctgattagagtgcagtagtgtcctgaaatatccttactgaagctataagaatcattcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgattagagtgcagtagtgtcctgaaatatccttactgaagctataagaatcattcttt 559
Query: 361 ataggttgtcctgttttattcctgagtgatgttcagaggactgggggctttaatggtcaa 420
||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 560 ataggctgtcctgttttattcctgagtgatgtccagaggactgggggctttaatggtcaa 619
Query: 421 catctacaggtaaggtgttacatgatggaaggtgaacacaagggctgaaaatgtgagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 catctacaggtaaggtgttacatgatggaaggtgaacacaagggctgaaaatgtgagaga 679
Query: 481 aaggctgtgatctgaagtcttggagaaaggctgtgatctggggcctttttgcttgtccaa 540
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 680 aaggctgtgatctgaagtcttggagaaaggctgtgatctggagcctttttgcttgtccaa 739
Query: 541 cacccactcggtgcctctgaccaactacacatggagctgcttgtctttattcctttcact 600
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 740 cacccactcggtgcctctgaccaactacgcatggagctgcttgtctttattcctttcact 799
Query: 601 tccaataagatgtgaaggaatccacatctggaagaagaaaatcactagg 649
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tccaataagatgtgaaggaatccacatctggaagaagaaaatcactagg 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1051
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1041
Effective search space: 668322
Effective search space used: 668322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
