Query= MSMg01no488_b13.b1 MSMg01no488_b13.b1 CHROMAT_FILE:
MSMg01no488_b13.b1 PHD_FILE: MSMg01no488_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:54 2005
(632 letters)
>mm_chr2_21623807_21624839
Length = 1033
Score = 698 bits (361), Expect = 0.0
Identities = 400/413 (96%), Gaps = 3/413 (0%)
Strand = Plus / Minus
Query: 1 gtaaatgtatgctgaagattgctgtaagcacgtttctccaca-gatacagatgagattgc 59
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 412 gtaaatgtatgctgaagattgctgtaagcacgtttctccacaggatacagataagattgc 353
Query: 60 tttctctggttgatttttaaaaatattaacatgacatgaatttcctgagctgtacaaaat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tttctctggttgatttttaaaaatattaacatgacatgaatttcctgagctgtacaaaat 293
Query: 120 tcagagcccacacttagagaccttcagttactcaggctccagaggtgtattagagaaata 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 292 tcagagcccacacttagagaccttcagttactcaggttccagaggtgtattagagaaata 233
Query: 180 aacccgagtttaagtatttcctggctcttatttcttttttttttattaaatattttcttc 239
|||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 232 aacctgagttgaagtatttcctggctcttatttc-tttttttttattaaatattttcttc 174
Query: 240 atttacatttcgaatgctatcccaaaagtcccccataccctccccctgcactgttcccct 299
||||||||||| ||||||||||||||||| || |||||||||||||||||||| ||||||
Sbjct: 173 atttacatttcaaatgctatcccaaaagtgccacataccctccccctgcactgctcccct 114
Query: 300 acccattctctcccacttcttggccctgga-tttcccctgtactagtacatataaagtat 358
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 113 acccattctctcccacttcttggccctggattttcccctgtactggtacatataaagtat 54
Query: 359 actagaccaagggacctctcttcccaatgatggccaactaggccatcttctgc 411
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 53 actagaccaaggggcctctcttcccaatgatggccaactaggccatcttctgc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_b13.g1 MSMg01no488_b13.g1 CHROMAT_FILE:
MSMg01no488_b13.g1 PHD_FILE: MSMg01no488_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:10:54 2005
(677 letters)
>mm_chr2_21450377_21451453
Length = 1077
Score = 1270 bits (657), Expect = 0.0
Identities = 672/677 (99%)
Strand = Plus / Plus
Query: 1 tttatcagtttttatctttgaaggatttgttagttctaatggtctttttgtgagtgcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatcagtttttatctttgaaggatttgttagttctaatggtctttttgtgagtgcatt 260
Query: 61 aggttttctcgtatataaaacatacagaagacatgtatttgagagtcgaacctatccaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggttttctcgtatataaaacatacagaagacatgtatttgagagtcgaacctatccaat 320
Query: 121 tatttgatgccttctctcccatcctgttctctatttcatgcttgctttttgcccctgatg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttgatgccttctctcacatcctgttctctatttcatgcttgctttttgcccctgatg 380
Query: 181 tctgcttcctctttcttaccttttctctttcctttaccttcacctcttcttatgaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgcttcctctttcttaccttttctctttcctttaccttcacctcttcttatgaatttt 440
Query: 241 aaatataaaaacaatgaataatgttttggtagggctcatatgtatgtgaatgtctggcag 300
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaaagaaaaacaatgaataatgttttggtagggctcatatgtatgtgaatgtctggcag 500
Query: 301 tcccatcttcaaaaaggggctctaaagtttctccctctaagaaatggttggttattccca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcccatcttcaaaaaggggctctaaagtttctccctctaagaaatggttggttattccca 560
Query: 361 tgaggttcataccattattgcctcagtgagtgtgtcttgctgggctatcattgtctctca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaggttcataccattattgcctcagtgagtgtgtcttgctgggctatcattgtctctca 620
Query: 421 cggcgttcacacctgggtatgcttgatgatgacctcgatagtgtgtatcatatcctctag 480
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 621 cggcgttcacacctgggtatgcttgatgatgacctcgatagtgtgtgtcatatcctctag 680
Query: 481 gactaaaatgctagccagtattgatggagcttcttgttcagttcagcttgacttccccat 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 681 gactaaaatgctagccagtattgatggagcttcttgttcagtccagcttgacttccccat 740
Query: 541 gttctgttgctcaagtatgtggtatcttcagtaataggttcttactgtcaatttccagca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gttctgttgctcaagtatgtggtatcttcagtaataggttcttactgtcaatttccagca 800
Query: 601 ttgacattagcctataatgttttaggatctatgggactctgctgcccaacaactccaaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttgacattagcctataatgttttaggatctatgggactctgctgcccaacaactccaaaa 860
Query: 661 cacataacagcagccac 677
|||||||||||||||||
Sbjct: 861 cacataacagcagccac 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
