GGGGNCCTCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCATAAGTTCCTGAAGACTAGTTTTCTTTCCTAATAGCATA
CATAGCATGTCCCAGCACTATAAAAGATATCAGACAGGGATAGGCATTCC
AGGTCAGAACTAGCTTGATATCTCCATGTCTGAAGACTCAGTTATGTGGT
GTTTTTAGCAACAGGGTCTTACAATTAAGTTCTTGAGGGCAGCCAAGAGC
ATTGTTCATAGCCTGTAATATTTGGTGGGAGATCTTTTGGACTTCACTGG
CCAAGAACTTGAAAATAGGTAACCTACTTTTGGCTTTGGACATTTTGTTG
GATAGCTTATGGTGTGTAGAGAGGGTTTAGATCCTCTTTTTTTTTTCTTC
AAAATCGATATGCCAGCATATAGCCATACTTTTGTTTGTTTTCTCTACTT
TTGTTTTCACAATTATGCTTTCATTTTACAAGGAAGAAATTAAATAAATG
AAAAGGGCAACAAAATGCATGCCTTATATTCCTTTTGATCTTCACATTAT
ACTAGCTGTAAACTTTCTGGACACCAAAGACACATATCCCAATATATTGG
CTGCCAGTAAAACCTCCTCAGTAAGGCAGTATAATTTCATTTCATTTTAA
ATGTATATTTCTTTTAAGGAAAAGGAGCATACTGTAAATGAACTACTATT
TTTCAGGCTGTAATATTCTGATTTCAAATACTCTTTGGAGTGAAGAAGCA
GAAATCAAAGAAAAAT

NNNCCGATGATAGGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCCCTGGTCTGAGAAGCTTCA
TATTCATAATACCAATGTAGCCTGAAGGCCAGGCTTTCCAGGAATTATAT
GAGACTCCAGAACTGAAGTGGGGCTGCTGTTCTGAACTGAGCAGCTATGA
TAGTCTAGGTCTTTGTGCTAGAAGACAGTTGTTGAACTAGATGGATCATA
GCCTATAAGTCACTCTAATAACTAGCTCCCCCACCCCCACCTTTTTTTGT
TTTTGTTTTTGTTTTATTGTTGTTGTTTTTTTTTTTTTTTTTGGGTTTTT
TGTTTTTTGAGACAGGAATTCTTTGTGTGGTCTTGACTGTCCTGGAACTA
GCTCTATAGACAAGGCTGGCCTCAAGCCACAGAGGTCCACCTGACTCTGC
TTCTTGAGTGCTGGGATTAGGGGTGTGCACCATCACCACCCAGCAATAAG
CCCCCCTTTAATTCAGTTCCTTTAAAGAACCCTCCTCAATACAGCCAAAT
TTATATTATGTTACATATATTTACATATATGTTGTATATTATATATATAT
ATATGTATATATAGACATATTTCACAGTAGTACATTATTTTGATGCATAT
ATAAGTTGTGTTTTGTGTAATTAATCTTTAGAATTTATCTCTCCAAGCAT
TTATCATTCATTTGTACCAGACATGGAAAGATTAGAACTGCCCCACCTTT
GATAG

Query= MSMg01no489_c11.b1 MSMg01no489_c11.b1 CHROMAT_FILE:
MSMg01no489_c11.b1 PHD_FILE: MSMg01no489_c11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:17 2005
         (649 letters)



>mm_chr2_23574137_23575188
          Length = 1052

 Score = 1218 bits (630), Expect = 0.0
 Identities = 643/648 (99%), Gaps = 3/648 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   gactagttttctttcctaatagcatacatagcatgtcccagcactataaaagatatcaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gactagttttctttcctaatagcatacatagcatgtcccagcactataaaagatatcaga 260

                                                                       
Query: 61  cagggataggcattccaggtcagaactagcttgatatctccatgtctgaagactcagtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagggataggcattccaggtcagaactagcttgatatctccatgtctgaagactcagtta 320

                                                                       
Query: 121 tgtggtgtttttagcaacagggtcttacaattaagttcttgagggcagccaagagcattg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtggtgtttttagcaacagggtcttacaattaagttcttgagggcagccaagagcattg 380

                                                                       
Query: 181 ttcatagcctgtaatatttggtgggagatcttttggacttcactggccaagaacttgaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcatagcctgtaatatttggtgggagatcttttggacttcactggccaagaacttgaaa 440

                                                                       
Query: 241 ataggtaacctacttttggctttggacattttgttggatagcttatggtgtgtagagagg 300
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataggtaacccacttttggctttggacattttgttggatagcttatggtgtgtagagagg 500

                                                                       
Query: 301 gtttagatcctctttttttttt--cttcaaaa-tcgatatgccagcatatagccatactt 357
           ||||||||||||||||||||||  |||||||| ||||||||||||||| |||||||||||
Sbjct: 501 gtttagatcctcttttttttttttcttcaaaaatcgatatgccagcatttagccatactt 560

                                                                       
Query: 358 ttgtttgttttctctacttttgttttcacaattatgctttcattttacaaggaagaaatt 417
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtttgttttctctacttttgttttcacaattatgctttcattttacaaggaagaaatt 620

                                                                       
Query: 418 aaataaatgaaaagggcaacaaaatgcatgccttatattccttttgatcttcacattata 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaataaatgaaaagggcaacaaaatgcatgccttatattccttttgatcttcacattata 680

                                                                       
Query: 478 ctagctgtaaactttctggacaccaaagacacatatcccaatatattggctgccagtaaa 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctagctgtaaactttctggacaccaaagacacatatcccaatatattggctgccagtaaa 740

                                                                       
Query: 538 acctcctcagtaaggcagtataatttcatttcattttaaatgtatatttcttttaaggaa 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acctcctcagtaaggcagtataatttcatttcattttaaatgtatatttcttttaaggaa 800

                                                           
Query: 598 aaggagcatactgtaaatgaactactatttttcaggctgtaatattct 645
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaggagcatactgtaaatgaactactatttttcaggctgtaatattct 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1052
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1042
Effective search space:   665838
Effective search space used:   665838
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)