Query= MSMg01no489_d24.b1 MSMg01no489_d24.b1 CHROMAT_FILE:
MSMg01no489_d24.b1 PHD_FILE: MSMg01no489_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:25 2005
(617 letters)
>mm_chr2_76899876_76900892
Length = 1017
Score = 1100 bits (569), Expect = 0.0
Identities = 602/613 (98%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 6 aattggttgttttctctagataaaagctatgcctgcatgtagtctggaaaatggccacta 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattggttgttttctctagataaaagctatgcctgcatgtagtctggaaaatggccacta 265
Query: 66 gagggatgtaataccttgttcaaattgcatgtcttgaaagtccttccagcacagagaaca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gagggatgtaataccttgttcaaattgcatgtcttgaaagtccttccagcacagagaaca 325
Query: 126 caaaataagaaaacaaaacccaaaaccaagcatttcttcagtaaaaatatcaccttcgca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 caaaataagaaaacaaaacccaaaaccaagcatttcttcagtaaaaatatcaccttcgca 385
Query: 186 aaaccataattttaattttgacaaatcaatgccaataaaataggatctgtttgtttctga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaaccataattttaattttgacaaatcaatgccaataaaataggatctgtttgtttctga 445
Query: 246 ttttgtttttcaatcacctaggagatttatttgtttcttatcaggcactttatctattgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttttgtttttcaatcacctaggagatttatttgtttcttatcaggcactttatctattgt 505
Query: 306 gctgtaaattccttaagggtaaggactggtgcccgacttactcctataatccttgtagcc 365
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gctataaattctttaagggtaaggactggtgcccgacttactcctataatccttgtagcc 565
Query: 366 ttgagcacatggtcttataataacggaaggttaatacatttttttaaaagtttgagacag 425
||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 566 ttgagcacatggtcttataataacggaaggttaatacatttcttaaaaagttcgagacag 625
Query: 426 agtctcagctctccgagcctgacctcaatctttccatgtagcctggggaccttgaactct 485
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agtctcagctctcagagcctgacctcaatctttccatgtagcctggggaccttgaactct 685
Query: 486 taatccttctctgtctatctcctgggttctgggattaccggcacacactaccactgatgg 545
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 686 taatccttctctgtctatctcctgagttctgggattaccggcacacactgccactgatgg 745
Query: 546 tttat-ggatgctggagagtatactttctaggcaagcactctaccaactgaactacatct 604
||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 746 tttatagggtgctggagagtatactttctaggcaagcactctaccacctgaactacatct 805
Query: 605 ctagaccaattaa 617
|||||||||||||
Sbjct: 806 ctagaccaattaa 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_d24.g1 MSMg01no489_d24.g1 CHROMAT_FILE:
MSMg01no489_d24.g1 PHD_FILE: MSMg01no489_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:25 2005
(302 letters)
>mm_chr2_76972442_76973143
Length = 702
Score = 576 bits (298), Expect = e-169
Identities = 301/302 (99%)
Strand = Plus / Minus
Query: 1 ataatgaattttaaaatagaaaggtggagatatcagggcaatttcatgtagtattatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ataatgaattttaaaatagaaaggtggagatatcagggcaatttcatgtagtattatgtg 443
Query: 61 ctgaggaaaaaagatctttatgctattttctaaattgaacgaacacaccaatcaaattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgaggaaaaaagatctttatgctattttctaaattgaacgaacacaccaatcaaattat 383
Query: 121 ctcaccagttactaacgtagcagtagacttcctgtctgttgtgattcctcaggaagtaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctcaccagttactaacgtagcagtagacttcctgtctgttgtgattcctcaggaagtaga 323
Query: 181 tcatcacgctgtgtggatgtgagatgttcctttgcaatgtgtctgtggtgtttcccagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tcatcacgctgtgtggatgtgagatgttcctttgcaatgtgtctgtggtgtttcccagaa 263
Query: 241 gcttcgctgcatcctttactccatttttctcagccttcttgcatccaattctaacctgtc 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 262 gcttcgctgcatcctttactccatctttctcagccttcttgcatccaattctaacctgtc 203
Query: 301 ct 302
||
Sbjct: 202 ct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 702
Length adjustment: 9
Effective length of query: 293
Effective length of database: 693
Effective search space: 203049
Effective search space used: 203049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|