AGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCAGGATTTCCAACATTTTCTTGACTTCTGGCATGAACATACT
ACACAGAAATACATTCAGTCAAACACACATGCGCACACGCACGCGCGCGC
GCACACACACACACACACACACACACACACTCACATGCTAAAAATATTGA
AAACCAAGAACACAGGCTGATTGAAGAAAAATTAGTCACAAAATCAGTCA
GTGGGAATTACAAGTAATGCCAGAATTAGGTTCATTTAATTGTTTGACAT
GAAAGTAAGCTCAGGCTAAATTTCTCCCATACATAATAGAATTGAGAAAA
AGAGGACAAAGTTTTCATCATGCCATTAAAATATATTTTAAAAGATATCA
CACCATTTATGATAAGAGTGGATGAGGCTGGTGTAACTATGTTAAGAGAT
ATAATCGGAGTACATAGAAGTATAGACTGCGTGATTTAACTCACATATGA
ATTTTAGGCAGTTGATCAGAAGTAGAGAGCATTTTAGGGGCCAAGAGAAT
TAGAGAATATTGATAAAAAGGTACCTAATTTCAGGTGGAAAATATAAATT
TGAGATGATTTATGAAGCCTCTAGTATATTACATTCTTGAAAACTACTGA
GCAGATGTTAAATTTTCTCACTGAAAATAAAACAAAACAAAAAAACAAGT
GATCTAATGCCTACGTTAATGAGCTCTCGGCAACATTTCTAATGCATGCA
TATTAAA

CATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGATTATTTCTGTACCCATTTTTA
ATGGGGTTATTTGATTTGATAAAGTCCATCTTCTTGAGTTTTTTTGTATA
TATTGGATATTAGTCCCCTATCAGAATTAGGATTGGTAAAGATACTTTCC
CAATTTGTTGGTGGCCTTTTTGTCTTATTGACAGTTTCCTTTGCCTTGCA
GAAGCTTTGCAATTTTATGAGGTCACATTTGTCCATTCTTGATGGTTTTT
GTCTTTGAGTTTGTTTATATAGTGGATTACGTTGATGGATTTCCATATAT
TAAACCATTCCTGCATCCCTGGAATGAAGCCTATTTGATCATGATGAATG
ATCGTTTTGATGTGTTCTTCAATTCAGTTAGCAAGAATTTTTTTGAGTAT
TTTTTGAGTATTTTTGCATTGATATTCATAAGGGAAAGTGGTCTGAAGTT
CTCTTTCTTTGTTCAGTCTTTGTGTGTTTTAGGTATCAGAGTACTTGGGG
CTTCATAGAATGAATTGGGTAGAGTACCTTCTGTTTTTATTTTGTGGAAT
AGTTGGAGGAGAATTAGAATTAGGTCTTCTTTGAAGGTCTGATAGAACTC
TGCACTAAACCCTTCTGGTCCTGGGCTGTTTTGGTTGGGAGACTATTAAT
GACTGCTTCTATTTCTTTAGGGTATATGGGCCAGTTTAGTTCATTAATCT
GATCCTGATTTATTTTTGGGATCTGGGA

Query= MSMg01no490_d20.b1 MSMg01no490_d20.b1 CHROMAT_FILE:
MSMg01no490_d20.b1 PHD_FILE: MSMg01no490_d20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:46 2005
         (686 letters)



>mm_chr2_82284357_82285442
          Length = 1086

 Score = 1170 bits (605), Expect = 0.0
 Identities = 666/691 (96%), Gaps = 10/691 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ttcttgacttctggcatgaacatactacacagaaatacattcagtcaaacacacatgcgc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 198 ttcttgacttctggcatgaacatactacacagaaatacattcagtcaaacacacat--gc 255

                                                                       
Query: 64  aca----cgcacg----cgcgcgcgcacacacacacacacacacacacacacactcacat 115
           |||    ||| ||    || |||| ||||||||||||||||||||||||||||| |||||
Sbjct: 256 acatgtgcgcgcgtgcacgtgcgcacacacacacacacacacacacacacacacacacat 315

                                                                       
Query: 116 gctaaaaatattgaaaaccaagaacacaggctgattgaagaaaaattagtcacaaaatca 175
           ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 316 gctaaaaatattgaaaaccaagaacacaggcagattgaagaaaatttagtcacaaaatca 375

                                                                       
Query: 176 gtcagtgggaattacaagtaatgccagaattaggttcatttaattgtttgacatgaaagt 235
            |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 376 ctcagtgggaattacaagtaatgccagaactaggttcatttaattgtttgacatgaaagt 435

                                                                       
Query: 236 aagctcaggctaaatttctcccatacataatagaattgagaaaaagaggacaaagttttc 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 aagctcaggctaaatttctcccatacataatagaattgagaaaaagaggacaaagttttc 495

                                                                       
Query: 296 atcatgccattaaaatatattttaaaagatatcacaccatttatgataagagtggatgag 355
           |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 496 atcatgacattaaaatatattttaaaagatatcacaccatttatgataagggtggataag 555

                                                                       
Query: 356 gctggtgtaactatgttaagagatataatcggagtacatagaagtatagactgcgtgatt 415
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 556 gctggtgtaactatgttaagagatataatcagagtacatagaagtatagactgcgtgatt 615

                                                                       
Query: 416 taactcacatatgaattttaggcagttgatcagaagtagagagcattttaggggccaaga 475
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 616 taactcacatatgaattttaggcagttgatcagaagtagagaacattttaggggccaaga 675

                                                                       
Query: 476 gaattagagaatattgataaaaaggtacctaatttcaggtggaaaatataaatttgagat 535
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaattagagaatgttgataaaaaggtacctaatttcaggtggaaaatataaatttgagat 735

                                                                       
Query: 536 gatttatgaagcctctagtatattacattcttgaaaactactgagcagatgttaaatttt 595
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 736 gatttatgaagcctctagtatattacattcttgaaaactactgagcagatgttaaattta 795

                                                                       
Query: 596 ctcactgaaaataaaacaaaacaaaaaaacaagtgatctaatgcctacgttaatgagctc 655
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ctcactgaaaataaaacaaaacaaaaaaacaagtgatctaatgcctacgttaatgagctc 855

                                          
Query: 656 tcggcaacatttctaatgcatgcatattaaa 686
           |||||||||||||||||||||||||||||||
Sbjct: 856 tcggcaacatttctaatgcatgcatattaaa 886


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space:   727376
Effective search space used:   727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)