Query= MSMg01no490_j03.b1 MSMg01no490_j03.b1 CHROMAT_FILE:
MSMg01no490_j03.b1 PHD_FILE: MSMg01no490_j03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:11 2005
(244 letters)
>mm_chr2_120454073_120454716
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 1 agttgaagtcagcctggagttcagcgtgaagtcccgtctcaaaacaacaacaatgaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agttgaagtcagcctggagttcagcgtgaagtcccgtctcaaaacaacaacaatgaaatg 252
Query: 61 agaaaaacaaatgattttgtaattctaaggtgcgtttaaatgaagaggcttggggctggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 agaaaaacaaatgattttgtaattctaaggtgcgtttaaatgaagaggcttggggctggt 192
Query: 121 gagatggctcagtgagtaagagcacccgactgctctttcgaaggtctggagttcaaatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gagatggctcagtgagtaagagcacccgactgctctttcgaaggtctggagttcaaatcc 132
Query: 181 cagcaactacatggtggctcacaaccatccgtaacaagatctgactccttcttctggagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 cagcaactacatggtggctcacaaccatccgtaacaagatctgactccttcttctggagt 72
Query: 241 gtct 244
||||
Sbjct: 71 gtct 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no490_j03.g1 MSMg01no490_j03.g1 CHROMAT_FILE:
MSMg01no490_j03.g1 PHD_FILE: MSMg01no490_j03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:14:11 2005
(470 letters)
>mm_chr2_120312951_120313819
Length = 869
Score = 878 bits (454), Expect = 0.0
Identities = 466/470 (99%), Gaps = 1/470 (0%)
Strand = Plus / Plus
Query: 1 cctccatgtggctcccagaagcttccccaaagctgttgttactgggccagcggatgctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctccatgtggctcccagaagcttccccaaagctgttgttactgggccagcggatgctga 260
Query: 61 gatgcctgtcgagagctcagagggcgttggtggtctatctacccttgtgccgaggaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatgcctgtcgagagctcagagggcgttggtggtctatctacccttgtgccgaggaaccc 320
Query: 121 tcaagaactagaacttgaacatctttgcccctgaattcaggcatagtcctgtcacagcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaagaactagaacttgaacatctttgcccctgaattcaggcatagtcctgtcacagcag 380
Query: 181 ggaaccgccccgtatgtattgccagcattgggagtcttgacttccatgttctagtaagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaaccgccccgtatgtattgccagcattgggagtcttgacttccatgttctagtaagtg 440
Query: 241 tgtatttaggtgaagtgacagcaagagaactctctttctcaaatccttctttggggaata 300
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tg-agagaggtgaagtgacagcaagagaactctctttctcaaatccttctttggggaata 499
Query: 301 gtcaactctagatgggctcagaggaaggcacagaccccagatgtccccctctcctctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gtcaactctagatgggctcagaggaaggcacagaccccagatgtccccctctcctctgct 559
Query: 361 gaggaagtctagaatggaggggaaattcttttacttacctcctattccaggactcacctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaggaagtctagaatggaggggaaattcttttacttacctcctattccaggactcacctt 619
Query: 421 gatctctggccatcagggcagcaagatcagctaggaggagtagggcagca 470
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 gatctctggccatcagggcagcaagatcagctaggaggagtagggcagca 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 869
Length adjustment: 10
Effective length of query: 460
Effective length of database: 859
Effective search space: 395140
Effective search space used: 395140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
