Query= MSMg01no491_d15.b1 MSMg01no491_d15.b1 CHROMAT_FILE:
MSMg01no491_d15.b1 PHD_FILE: MSMg01no491_d15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:04 2005
(685 letters)
>mm_chr2_140904861_140905946
Length = 1086
Score = 1226 bits (634), Expect = 0.0
Identities = 677/696 (97%), Gaps = 11/696 (1%)
Strand = Plus / Plus
Query: 1 agttgagagatcactcacctgtctattaggaaggcatcctgatgtta-ttaattgtcagt 59
||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 201 agttgagagatcactcacctgtctattaggacggcatcctcatgttaattaattgtcagt 260
Query: 60 acaacctgggcttcttgagtctagatgtaccaagagggtctggattctgtttggtaaatg 119
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 acaacctgggcttcttgaatctagatgtaccaagagggtctggattccgtttggtaaatg 320
Query: 120 ttctttgagctactaaatgctagaaattataagctgtaaaacatttagttgtaggaaggt 179
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctttgtgctactaaatgctaaaaattataagctgtaaaacatttagttgtaggaaggt 380
Query: 180 aggaaggtcaccttaatgcacacatatgtctattattaagacaagtagggcatcgagggc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggaaggtcaccttaatgcacacatatgtctattattaagacaagtagggcatcgagggc 440
Query: 240 atcagaaaactgttaattcaaataaagcaaagatacttagttacctagcataaggccaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcagaaaactgttaattcaaataaagcaaagatacttagttacctagcataaggccaga 500
Query: 300 atctagtatgcatttatattagattaagaagcgtttctcctgggttaacattgcatcagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctagtatgcatttatattagattaagaagcgtttctcctgggttaacattgcatcagt 560
Query: 360 tgtccaacacaggttccaaactagttaataccattttgaggtgaattagtttcaaaaatc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtccaacacaggttccaaactagttaataccattttgaggtgaattagtttcaaaaatc 620
Query: 420 ttgagatgagagatctttgtctctctgcattgagtaggctatggttgagaggcagggggc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 ttgagatgagagatctttgtctctctgcattgagtaggctatggttgagaggcggggggc 680
Query: 480 a--------attgctattaaaaataatcagcatgtctattctctatggatctctagaata 531
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aggaggggaattgctattaaaaataatcagcatgtctattctctatggatctctagaata 740
Query: 532 acagaaaagaatcattcattcattcattgtctagttatcatctatctataatctatgtat 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acagaaaagaatcattcattcattcattgtctagttatcatctatctataatctatgtat 800
Query: 592 ccatctacctgtataaatatgctatatttattcactacatatatgtatttgtatatcatc 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccatctacctgtataaatatgctatatttattcactacatatatgtatttgtatatcatc 860
Query: 652 tatttattcatctatatgta-at-cattaatatatg 685
||||||||||||||||| || || ||||||||||||
Sbjct: 861 tatttattcatctatatatatattcattaatatatg 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 685
Length of database: 1086
Length adjustment: 10
Effective length of query: 675
Effective length of database: 1076
Effective search space: 726300
Effective search space used: 726300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_d15.g1 MSMg01no491_d15.g1 CHROMAT_FILE:
MSMg01no491_d15.g1 PHD_FILE: MSMg01no491_d15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:05 2005
(212 letters)
>mm_chr2_141060755_141061366
Length = 612
Score = 404 bits (209), Expect = e-117
Identities = 209/209 (100%)
Strand = Plus / Minus
Query: 1 attcatctagaatgcctcagaaaagacaagagacttctgctaattccctggctgctgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 attcatctagaatgcctcagaaaagacaagagacttctgctaattccctggctgctgttt 350
Query: 61 gagatgcagagaaatctgctagcctgggattccaggtgcgttcacctgcagggggcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gagatgcagagaaatctgctagcctgggattccaggtgcgttcacctgcagggggcagga 290
Query: 121 ggaagaagcaagatcaagcaagcactggggaagccaagaattttataatcaccgctgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ggaagaagcaagatcaagcaagcactggggaagccaagaattttataatcaccgctgggg 230
Query: 181 tggtgagtggggtgggtaggtggagggtg 209
|||||||||||||||||||||||||||||
Sbjct: 229 tggtgagtggggtgggtaggtggagggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
