Query= MSMg01no492_a17.b1 MSMg01no492_a17.b1 CHROMAT_FILE:
MSMg01no492_a17.b1 PHD_FILE: MSMg01no492_a17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:09 2005
(595 letters)
>mm_chr2_127309900_127310893
Length = 994
Score = 1081 bits (559), Expect = 0.0
Identities = 586/599 (97%), Gaps = 9/599 (1%)
Strand = Plus / Minus
Query: 1 aactctctaaaccagaccaggctttcagacacccctgactgagtaccctacacatcctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 aactctctaaaccagaccaggctttcagacacccctgactgagtaccctacacatcctga 735
Query: 61 ggccttcaagtgagcttcgccccgcgacttctttaggaagcacgggctgctgcctctctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 734 ggccttcaagtgagcttcgccccgcgacttctttaggaagcacgggctgctccctctctg 675
Query: 121 tggccccctcatcttcacctacagagattccccgcctcataccctccccgaacctttcct 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 674 tggccccctcatcttcacctacagagattccccgcctcataccctcccc-aacctttcct 616
Query: 181 ttccccaaaggctatgcaaaagctgccacttcccaacatgtgaccgcaggcttgggagct 240
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttccccaaaggctatgcaaatgctgccacttcccaacatgtgaccgcaggcttgggagc- 557
Query: 241 ttttt----gttgaacgccagccaaagcagacagcccctgggggcgtggcccgccagagg 296
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ---atgagggttgaacgccagccaaagcagacagcccctgggggcgtggcccgccagagg 500
Query: 297 gcgtggcctggcttttgctagctaagagaagccgcttgagcgctgagtctagggtagaag 356
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcgtggcctgacttttgctagctaagagaagccgcttgagcgctgagtctagggtagaag 440
Query: 357 gatgtgagagaaccgtcacctagcgtcagtggatctcggttacacccgaggctgacaggg 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gatgtgagagaaccgtcacctagcgtcagtggatctcggttacacccgaggctgacaggg 380
Query: 417 cccaactctgagcgacctggagagtccacttccatccattaggcctgcagcccaggctgt 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cccaactctgagcgacctggagagtccacttccatccattaggcctgcagcccaggctgt 320
Query: 477 tcataccgcggggctactgcgctctcgagcctcggatccacttaggcgtcgttaatattt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tcataccgcggggctactgcgctctcgagcctcggatccacttaggcgtcgttaatattt 260
Query: 537 tacgccgcacagccaggggatcgatgacttgcttatagctcagtgcttatgagcagcca 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tacgccgcacagccaggggatcgatgacttgcttatagctcagtgcttatgagcagcca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 994
Length adjustment: 10
Effective length of query: 585
Effective length of database: 984
Effective search space: 575640
Effective search space used: 575640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no492_a17.g1 MSMg01no492_a17.g1 CHROMAT_FILE:
MSMg01no492_a17.g1 PHD_FILE: MSMg01no492_a17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:09 2005
(369 letters)
>mm_chr2_127136629_127137397
Length = 769
Score = 698 bits (361), Expect = 0.0
Identities = 367/369 (99%)
Strand = Plus / Plus
Query: 1 cttcttttcttcaccttcccaacatgctagacaagacccctggcttgggactacctcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttcttttcttcaccttcccaacatgctagacaagacccctggcttgggactacctcctc 260
Query: 61 aaatcaagagaggatggttttgtggttgttgtttttgcccctgtgagatcaatgatggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatcaagagaggatggttttgtggttgttgtttttgcccctgtgagatcaatgatggtg 320
Query: 121 cccagggccttgtgcataccaggcagccagagtgttttttctagaattctgtatgaatgg 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 cccagggccttgtgcataccaggcagccagagtgcattttctagaattctgtatgaatgg 380
Query: 181 agtcttaaatatatatgtatatttttaaagatatattttatttttatttatgtgtgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcttaaatatatatgtatatttttaaagatatattttatttttatttatgtgtgtttt 440
Query: 241 gtatattatgtgttgtttttgcaagcatatgttcctgagtagaggtgcctgcagagggca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatattatgtgttgtttttgcaagcatatgttcctgagtagaggtgcctgcagagggca 500
Query: 301 ccagatcccctgtgactagactcagagatggttattgggggtgagaaccaaattctggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagatcccctgtgactagactcagagatggttattgggggtgagaaccaaattctggtt 560
Query: 361 ctggaagag 369
|||||||||
Sbjct: 561 ctggaagag 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
