NCCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCAAAGGTCTGTGGTCTTGAGGTTGTCATCAAGGGTTCTCTTTG
CAGGAAATTTCTGCTATATCCCAAACTGTTGTAGAGTTGTCCAGATCCAA
ACTCTGGACCAGAGCTCATCATGCATGCATTTGATGTAGAAGCTTCCATT
TTATTAAAGTTCCTCCTTATGGGCCCATCTTGTCTGTCCTTAGACCTGTG
AAGATTCCCAAAGGCAAACATAAGTCTTATTGTTACGAAGGACCAGCCTC
ATCTTTGGAGAGAGGTTTTGAGGAAGGGGTATCTGGCAATTGAGAAAGAA
TGACTCAATGTCAAATCGTGGGTTTCAAGCTGATGGTCTATGTTCTGCTA
GAGACAGTTTTCCAGATAAATCTCTACTGAGACAGCTCTCTCTTGCAATT
CCAGAAACTCTCTTGGTAGCTGCTCTCTTGAAGATCAAAATCCCAGTCTT
TCATTGACATATCACTTTAGCCATTACCCCAGAATCAGCATCCCATGACC
CCAGCAACGTCATTCTTTCAAAAAGACAGCAAACACTTTTTTTTTATCAT
TGCAGATAAATTCAGATAGTTGCCTGGTTTTGTAAGCACAAACAATAAGG
TAGTTAGGTAAGATCTTGCCCTGGGATTACCATTTTACTATGCCTGGGAT
TAACTAGCTCTGTCCCAGCTGACCTTGACTCANGAACTGTCTGCCTTTGA
TTTGCTGGCTTAAA

ATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAA
GCACCTGAAAAAATGTTCAACATCCTAAATCATCAGGGAAATGCAAATCA
AAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA
AATTCAGGTGACAGCAGATGCTGGCATGGATGTGGAGAAAGAGGAACACT
CCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAG
TCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCA
ATACCTCTCCTGGGCATTTATCCAGAAGATGCCCAAACTGGTAAGAAGGA
CACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCT
GGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGT
TACATCTACACAATGGTGTACTACTCAGCTATTAAAAAGAATGAATTTAT
GAAATTCCTAGCCAAATGGATGGACCTGGAGAGCATCATCCTGAGTGAGG
TAACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGA
TATTAGCCTCAAACCTANGATTCCCAAGATATAAGGTACAATTTGCTAAA
CACATGAAACTCAAGAAGATGAAGACTGGAGTGTGGACACTATGCCCTGC
CTTAGAANTGGGAACAAAA

Query= MSMg01no493_d23.b1 MSMg01no493_d23.b1 CHROMAT_FILE:
MSMg01no493_d23.b1 PHD_FILE: MSMg01no493_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:42 2005
         (520 letters)



>mm_chr2_68579181_68580105
          Length = 925

 Score =  758 bits (392), Expect = 0.0
 Identities = 430/446 (96%), Gaps = 8/446 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcaaaggtctgtggtcttgaggttgtcatcaagggttctctttgcaggaaattt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaattctcaaaggtctgtggtcttgaggttgtcatcaagggttctctttgcaggaaattt 386

                                                                       
Query: 65  ctgctatatcccaaactgttgtagagttgtccagatccaaactctggaccagagctcatc 124
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 ctgctatatcccaaactgttgtagagctgtccagatccaaactctggaccagagctcatc 326

                                                                       
Query: 125 atgcatgcatttgatgtag------aagcttccattttattaaagttcctccttatgggc 178
           |||||||| ||||||||||      ||||||||||||||||||||||| | |||||||||
Sbjct: 325 atgcatgcgtttgatgtagaagtataagcttccattttattaaagttctttcttatgggc 266

                                                                       
Query: 179 ccatcttgtctgtccttagacctgtgaagattcccaaaggcaaacataagtcttattgtt 238
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 265 ccatcttgtctgtccttagacctgtgaagattcccaaaggcaaacat-agtcttattgtt 207

                                                                       
Query: 239 acgaaggaccagcctcatctttggagagagg-ttttgaggaaggggtatctggcaattga 297
           || |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 206 accaaggaccagcctcatctttggagagaggtttttgaggaaggggtatctgggaattga 147

                                                                       
Query: 298 gaaagaatgactcaatgtcaaatcgtgggtttcaagctgatggtctatgttctgctagag 357
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 146 gaaagaatgactcaatgtcaaattgtgggtttcaagctgatggtctatgttctgctagag 87

                                                                       
Query: 358 acagttttccagataaatctctactgagacagctctctcttgcaattccagaaactctct 417
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86  acagttttccagataactctctactgagacagctctctcttgcaattccagaaactctct 27

                                     
Query: 418 tggtagctgctctcttgaagatcaaa 443
           ||||||||||||||||||||||||||
Sbjct: 26  tggtagctgctctcttgaagatcaaa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 520
Length of database: 925
Length adjustment: 10
Effective length of query: 510
Effective length of database: 915
Effective search space:   466650
Effective search space used:   466650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)