Query= MSMg01no493_g01.b1 MSMg01no493_g01.b1 CHROMAT_FILE:
MSMg01no493_g01.b1 PHD_FILE: MSMg01no493_g01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:53 2005
(697 letters)
>mm_chr2_96349035_96350132
Length = 1098
Score = 1288 bits (666), Expect = 0.0
Identities = 678/682 (99%), Gaps = 1/682 (0%)
Strand = Plus / Plus
Query: 17 gaattctgcttatgaaatgctaactgtagccctggttgattttgcacagcagccagagga 76
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattctgcttaggaaatgctaactgtagccctggttgattttgcacagcagccagagga 276
Query: 77 ggtctacatcacttcttagccacccacaatactaattaaatttacccatgtgaaaaggga 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 ggtctacatcacttcttagccacccacaatactaattaaatttacccatgtgaaaaggga 336
Query: 137 acacccaccctggttattttgagccagcttgttgaaacactggttgaatccttctgtatc 196
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 337 acacccaccctggttattttgagccagtttgttgaaacactggttgaatccttctgtatc 396
Query: 197 tttgtatttccccatctcaaaactataggaacccacagaacttaccacaggagcaaagag 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tttgtatttccccatctcaaaactataggaacccacagaacttaccacaggagcaaagag 456
Query: 257 aaccaattttccttttggaaacacgacaggatttataaagacagggagaaagttttaatc 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 aaccaattttccttttggaaacacgacaggatttataaagacagggagaaagttttaatc 516
Query: 317 cccagccagccttctatgagagtcctgatgttacctgctagcattttttcctttatggtt 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cccagccagccttctatgagagtcctgatgttacctgctagcattttttcctttatggtt 576
Query: 377 ttcctctgtagagtgaaagaacttgttccctggagtcaagtagatctagattaagataaa 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ttcctctgtagagtgaaagaacttgttccctggagtcaagtagatctagattaagataaa 636
Query: 437 gccctgcatttcccctggtatgattctaaaaccatcatttaagctacctgcatctgatac 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gccctgcatttcccctggtatgattctaaaaccatcatttaagctacctgcatctgatac 696
Query: 497 aagagaaaagataaagtccacctggttcagagcaaacattaaatattataatgaataaag 556
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 aagagaaacgataaagtccacctggttcagagcaaacattaaatattataatgaataaag 756
Query: 557 aacatgagtggaaatttaacatttataatttgttttttctctctgtattctgctccatga 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 aacatgagtggaaatttaacatttataatttgttttttctctctgtattctgctccatga 816
Query: 617 ttggtagtattattctttaattaataaattacagtgttattgaggatctactgtgctata 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 817 ttggtagtattattctttaattaataaattacagtgttattgaggatctactgtgctata 876
Query: 677 gagaaaaaa-tattgtaaggaa 697
||||||||| ||||||||||||
Sbjct: 877 gagaaaaaaatattgtaaggaa 898
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 697
Length of database: 1098
Length adjustment: 10
Effective length of query: 687
Effective length of database: 1088
Effective search space: 747456
Effective search space used: 747456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_g01.g1 MSMg01no493_g01.g1 CHROMAT_FILE:
MSMg01no493_g01.g1 PHD_FILE: MSMg01no493_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:53 2005
(668 letters)
>mm_chr2_96386298_96387363
Length = 1066
Score = 1226 bits (634), Expect = 0.0
Identities = 659/670 (98%), Gaps = 6/670 (0%)
Strand = Plus / Minus
Query: 1 aaatgatgttcggttagtttttgtaagggaaaggagttatctattaaatatggaaagcaa 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 866 aaatgatgttcggttagtttttgtaagggaaaggagttttctattaaatatggaaagcaa 807
Query: 61 gggaattcagaatagaaaaaaacctgacagagacagggcagccttaatttacatgtcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gggaattcagaatagaaaaaaacctgacagagacagggcagccttaatttacatgtcagc 747
Query: 121 tataatatccactttatgagattatttacttggtaactcaatggcctgcctcaaactagt 180
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 746 tataatatcaactttatgagattatttacttggtaactcaatggcatgcctcaaactagt 687
Query: 181 tgccatagtaacagtcacatgacacaggcatctctgagacactaattcttttcctgcaga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tgccatagtaaccgtcacatgacacaggcatctctgagacactaattcttttcctgcaga 627
Query: 241 ataccaaagtcccatcagcatctcataggaccattgccacaaaggataatgctgatggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ataccaaagtcccatcagcatctcataggaccattgccacaaaggataatgctgatggtg 567
Query: 301 tgaaggaaaggcaagtaccctgattcacagtaaagtttcctgtccc--atttaatgggat 358
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 566 tgaaggaaaggcaagtaccctgattcacagtaaagtttcctgtcccatattta----gat 511
Query: 359 ttaatgggagtgtgaatattcctttcaatagtttttacttgtatttatcacttcactatc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttaatgggagtgtgaatattcctttcaatagtttttacttgtatttatcacttcactatc 451
Query: 419 tttttgaacattatttactcaaatattagctttcaattaaagctgcatgaaattatttaa 478
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tttttgaatattatttactcaaatattagctttcaattaaagctgcatgaaattatttaa 391
Query: 479 aaacataagctaacaaaagttcatacaagataatttttaaaaaataacacctggaagttt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 aaacataagctaacaaaagttcatacaagataatttttaaaaaataacacctggaagttt 331
Query: 539 agagactagtttagtgtttacataatggtatatcctggtacccatctttttctgctttgt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agagactagtttagtgtttacataatggtatatcctggtacccatctttttctgctttgt 271
Query: 599 taacaatgtcagtttcttagtcgcaaaacacatcagcctagtttacatatttgaaatgag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 taacaatgtcagtttcttagtcgcaaaacacatcagcctagtttacatatttgaaatgag 211
Query: 659 acatgaagat 668
||||||||||
Sbjct: 210 acatgaagat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1066
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1056
Effective search space: 694848
Effective search space used: 694848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
