Query= MSMg01no494_f09.b1 MSMg01no494_f09.b1 CHROMAT_FILE:
MSMg01no494_f09.b1 PHD_FILE: MSMg01no494_f09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:09 2005
(604 letters)
>mm_chr2_77429766_77430768
Length = 1003
Score = 1135 bits (587), Expect = 0.0
Identities = 597/601 (99%), Gaps = 3/601 (0%)
Strand = Plus / Plus
Query: 5 gaattccctttcc-cgttctacctgatatctttgaagtagcaaagaatgatctggttgga 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctttccacgttctacctgatatctttgaagtagcaaagaatgatctggttgga 264
Query: 64 ttgccattccctgtcttctgacggattggttttgttgcatttaaagataaagccttcatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttgccattccctgtcttctgacggattggttttgttgcatttaaagataaagccttcatc 324
Query: 124 atttataacgaagtcacagaaatgaaaccctgggccagtctcctccgagtagcagtgcac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atttataacgaagtcacagaaatgaaaccctgggccagtctcctccgagtagcagtgcac 384
Query: 184 tattgcccagcccagatggtctctgtgtgacatgaagccacatgtgagagcaaattcttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tattgcccagcccagatggtctctgtgtgacatgaagccacatgtgagagcaaattcttg 444
Query: 244 ttgtgtgtacaaggaaacacttcatttctcccgggacagtctctttttatttaatagtga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgtgtgtacaaggaaacacttcatttctcccgggacagtctctttttatttaatagtga 504
Query: 304 aactgtgtatctgacacatgatcctttttacttgcctactggaacattcagattcaagaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aactgtgtatctgacacatgatcctttttacttgcctactggaacattcagattcaagaa 564
Query: 364 tgagccctaaagaaaaaaactacaaaagaaattatcccttgatcatttatggcattcttc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgagccctaaagaaaaaaactacaaaagaaattatcccttgatcatttatggcattcttc 624
Query: 424 cttctgggcttacttattttatgatgcatttgtttatgtgcatatatatatatttgttta 483
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 625 cttctgggcttacttattttatgatgcatttgtttatgtgcatatatatat--ttgttta 682
Query: 484 tattgcatatatatgcaaatgtttgtgttctatatattatggtcatttattttacctata 543
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 683 tattgcatatatatgcaaatgtttgtgttctatatattgtggtcatttattttacctata 742
Query: 544 attcagccataattttcctatttattcatgatgcacaatgctgtgaaaactttgtgcatg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 attcagccataattttcctatttattcatgatgcacaatgctgtgaaaactttgtgcatg 802
Query: 604 c 604
|
Sbjct: 803 c 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1003
Length adjustment: 10
Effective length of query: 594
Effective length of database: 993
Effective search space: 589842
Effective search space used: 589842
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no494_f09.g1 MSMg01no494_f09.g1 CHROMAT_FILE:
MSMg01no494_f09.g1 PHD_FILE: MSMg01no494_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:19:09 2005
(350 letters)
>mm_chr2_77580099_77580848
Length = 750
Score = 607 bits (314), Expect = e-178
Identities = 332/338 (98%)
Strand = Plus / Minus
Query: 9 aaaaaaatgtgtcttcggggaacaatcattaatatgtacaggcgcacacatagcccaaat 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aaaaaaatgtgtcttcggggaacaatcattaatatgtacaggcgcacacatagcccaaat 308
Query: 69 actctttccgagggatttttctaagtagccaaagcaggagggtggggggagatggaaata 128
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 307 actctttccgagggatttttctaagtagccaaagcaggagggtgaggggagatggaaata 248
Query: 129 tggctcagtggtggagcctgtgcctagcaacattcaggttccgcaactaagacgcatctg 188
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 247 tggctcagtagtggagcttgtgcctagcaacattcaggttccgcaactaagacgcatgtg 188
Query: 189 ccattgatggctgcaggggaagggaaaatcagttgtctgcaatggagtgtcactgggtat 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 187 ccattgatggctgcaggggaagggaaaatcagttgtctgcaatggagtgtcactgcgtat 128
Query: 249 agcaaccatattccagggcagactccagacccaggaggagctgaccaacatgaaaaaatt 308
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 127 agcaaccatattccagggcagactccaggcccaggaggagctgaccaacatgaaaaaatt 68
Query: 309 actttggagagtatgtgtatggtgtgtgtgtgtgtgtg 346
||||||||||||||||||||||||||||||||||||||
Sbjct: 67 actttggagagtatgtgtatggtgtgtgtgtgtgtgtg 30
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
