GCCCGTTTTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGA
GGATCCGCGGAATTCCCAGAGGTTCTCAGAATACTCTGGCAGTCTTGGAA
TGTATTCGTATTGTTAAAGCAGGTATACAGTTATTTAAAATCCACAGCGG
TAATGAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTNNNTTNNNNNNTTTNNTT
TNTTTNNNTTNTTTTTTTTTTTTNNNNNNTTTTTNTTTTTNTTTTTTTTN
NTTTTTTTTTTTNTTTNNTTTNNNTTTNNNNNNNNNNNNNNNTTTTNNNN
TTTTTTTTTTTTNTTTTTNNNNNNTTTNNTNTNNNNTNNNTTTTTTTTTN
TNNTNTTNNNTTTTNNNTTTTTNTTTTTTNNNNNNTTTTTTTTNNTTNNT
TTTTTNNTTTTTTTTNTTTTNTNNTTTTNNTTTTNTTTTTNNTNTTTTTT
TTTTTTTTTTTTNTTNNTTTTTTTTTTTTTNNNTTTTTTTTTNTTTNNNN
NTTTTNNTTTTTTTTTTNNNNNTTTTTTTNTNNNTTTNTTTTTTTTTTTT
NNTTTTTNTTTTTTTNNNNTTTTTTTTTTTTTTTNNTTTTTTTTTTTTTT
TTTNNNTNNNTTTTTTTTTTTTTTTTTTNTTTTT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXATAGTTACCTTTCTAATATATTAAATTC
CACGCTAGCCACAGCCTCAAAACAATTGTCTCAGAGAATGAAAGCCAAAC
CAAAAACAAACACACAAAAGTCCCTTGAGATCTTGTGAAAGCTCAATAAA
TGTGGTTCTTCCCAGGGTCTATTCCAGGACCCTCAGAATAACTCCCTCAA
AAGTGTTATAGCTCATAAATTTCATCTTACAAGATGTGAGCAGTACTAGA
CAGGTGGAACCAATTCAGGGATCCAGACAAGGGCTGCTGTTTGTCTTCCA
AATGCCGAAGCACTTGCTGTTCTTACAGCATGGTATGACAGCCACCATCT
TTTTTCCCGCCCTGTAACAATCTGTTCTTGATGTCGGGCTCTATCCCATT
TTCTTGCTGAAGGATCAGGTCTCTAAACCATATGCTGTAACTGGAAGGCT
AGCCCACTTGTAGCCTTTGGATTTTTAAATGAGTGAAATGCTACCTCTCC
TATTACTTCCCATTATCTTTGGACTTACCTCAGTCTGATCCTGAATCCTA
GTAATTTCTCTGACTGAGACTAAAGAATAGATGCAATGTGATCAGCAATT
TGAAGATTGGAATGCTGTGAAATTGCTCTCCTCTGCCACGTTTTTTGATT
CCCATTTTCAGAGGCTGTCCTGTCTCCTGCCATGAGTTGACATGGTGCTC
CTGATTCT

Query= MSMg01no495_g19.g1 MSMg01no495_g19.g1 CHROMAT_FILE:
MSMg01no495_g19.g1 PHD_FILE: MSMg01no495_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:20:30 2005
         (681 letters)



>mm_chr2_141689121_141690201
          Length = 1081

 Score = 1154 bits (597), Expect = 0.0
 Identities = 662/691 (95%), Gaps = 17/691 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   ttacctttctaatatattaaattccacgctagccacagcctcaaaacaattgtctcagag 64
           |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 194 ttacctttctaatatattaaattccatgctagccagagcctcaaaacaattgtctcagag 253

                                                                       
Query: 65  aatgaaagccaaaccaaaaacaaacacacaaaagtcccttgagatcttgtgaaagctcaa 124
           ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aatgaaaacaaaaccaaaaacaaacacacaaaagtcccttgagatcttgtgaaagctcaa 313

                                                                       
Query: 125 taaatgtggttcttcccagggtctattccaggaccctcagaataactccctcaaaagtgt 184
           | ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 t-aatgtagttcttcacagggtctattccaggaccctcagaataactccctcaaaagtgt 372

                                                                       
Query: 185 tatagctcataaatttcatcttacaagatgtgagcagtactagacaggtggaaccaattc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tatagctcataaatttcatcttacaagatgtgagcagtactagacaggtggaaccaattc 432

                                                                       
Query: 245 agggatccagacaagggctgctgt---t-t--gtcttccaaatgccgaagcacttgctgt 298
           ||||||||||||||||||||||||   | |  ||||||||||||||||||||||||||||
Sbjct: 433 agggatccagacaagggctgctgtctgtctgagtcttccaaatgccgaagcacttgctgt 492

                                                                       
Query: 299 tcttacagcatggtatgacagccaccatctttttt--------cccgccctgtaacaatc 350
           |||||||||||||||||||||||||||||  || |        ||| ||| |||||||||
Sbjct: 493 tcttacagcatggtatgacagccaccatc--ttctccccccccccccccccgtaacaatc 550

                                                                       
Query: 351 tgttcttgatgtcgggctctatcccattttcttgctgaaggatcaggtctctaaaccata 410
           |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 551 tgttcttgatgttgggctctatcccattttcttgctgagggatcaggtctctaaaccata 610

                                                                       
Query: 411 tgctgtaactggaaggctagcccacttgtagcctttggatttttaaatgagtgaaatgct 470
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 611 tgctgtaactggaaggctagcccagttgtagcctttggatttttaaatgagtgaaatgct 670

                                                                       
Query: 471 acctctcctattacttcccattatctttggacttacctcagtctgatcctgaatcctagt 530
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 acctctcctattacttcccattatctttggacttacctcagtctgatcctgaatcctagt 730

                                                                       
Query: 531 aatttctctgactgagactaaagaatagatgcaatgtgatcagcaatttgaagattggaa 590
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aatttctctgactgagactaaagaatagatgcaatgtgatcagcaatttgaagattggaa 790

                                                                       
Query: 591 tgctgtgaaattgctctcctctgccacgttttttgattcccattttcagaggctgtcctg 650
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tgctgtgaaattgctctcctctgccacgttttttgattcccattttcagaggctgtcctg 850

                                          
Query: 651 tctcctgccatgagttgacatggtgctcctg 681
           |||||||||||||||||||||||||||||||
Sbjct: 851 tctcctgccatgagttgacatggtgctcctg 881


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 681
Length of database: 1081
Length adjustment: 10
Effective length of query: 671
Effective length of database: 1071
Effective search space:   718641
Effective search space used:   718641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)