Query= MSMg01no496_b03.b1 MSMg01no496_b03.b1 CHROMAT_FILE:
MSMg01no496_b03.b1 PHD_FILE: MSMg01no496_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:17 2005
(655 letters)
>mm_chr2_160189130_160190185
Length = 1056
Score = 1210 bits (626), Expect = 0.0
Identities = 647/654 (98%), Gaps = 3/654 (0%)
Strand = Plus / Plus
Query: 4 ggaattcattgttacagaatgtcccaaacttgatgtccaactcttgaaacaagagagtta 63
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcattgccagagaatgtcccaaacttgatgtccaactcttgaaacaagagagtta 263
Query: 64 aagtcatgcagacacggagtcctctaaataaacaccatctccatggttttaataagcaaa 123
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 264 aagtcatgcagacacggagtcctctaaataaacaccatctacatggttttaataagcaaa 323
Query: 124 ataggaaaccattttaataaccaaaaaacagaaaccagtctgaattaaaactacaataag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ataggaaaccattttaataaccaaaaaacagaaaccagtctgaattaaaactacaataag 383
Query: 184 actagattttaatattttcatatcataagcagggggttgaaattgatcccttattttaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actagattttaatattttcatatcataagcagggggttgaaattgatcccttattttaca 443
Query: 244 tgaaattaaaaacaatttctgttgcgttgcggcaagtttgatttcaacacagttgaatca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaaattaaaaacaatttctgttgcgttgcggcaagtttgatttcaacacagttgaatca 503
Query: 304 gtaaaaaccaaagctcgtttccgatgcaggacgaatatccacaatatttaaaactgcaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtaaaaaccaaagctcgtttccgatgcaggacgaatatccacaatatttaaaactgcaag 563
Query: 364 caccatgcggttcatacaatcttgttatttactgtaaattgtatcaactaatacaaactc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 caccatgcggttcatacaatcttgttatttactgtaaattgtatcaactaatacaaactc 623
Query: 424 aaaacaaacaaacaaaaaagcatccagccagcagtgccagcaaattcaggtggggaattt 483
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 624 aaaacaaacaaacaaaaaagcatccagccagcagtgccagcaaattcaggtgggga-ttt 682
Query: 484 ttaaaa-gtccgctttcattttggtattttttttt-attgtcagtgcaaccgaatcctct 541
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 683 ttaaaaagtccgctttcattttggtattttttttttattgtcagtgcaaccgaatcctct 742
Query: 542 tactgacccgcagaaatgaaagtaacagtaaagaaaaacacctagacctcccctataact 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tactgacccgcagaaatgaaagtaacagtaaagaaaaacacctagacctcccctataact 802
Query: 602 actgtacaacggaagggacttgaacaccaccattaagtctccctgctctccaga 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 actgtacaacggaagggacttgaacaccaccattaagtctccctgctctccaga 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_b03.g1 MSMg01no496_b03.g1 CHROMAT_FILE:
MSMg01no496_b03.g1 PHD_FILE: MSMg01no496_b03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:17 2005
(656 letters)
>mm_chr2_160294509_160295564
Length = 1056
Score = 1245 bits (644), Expect = 0.0
Identities = 653/656 (99%)
Strand = Plus / Minus
Query: 1 tctggaggcaggctctctctctaaatcccaatgcacctatttcttataagccctgtgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 tctggaggcaggctctctctctaaatcccaatgcacctatttcttataagccctgtgaaa 797
Query: 61 ctgtcctagatgctcccagaaaagacccctcttctttttccagggcccagccatatgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ctgtcctagatgctcccagaaaagacccctcttctttttccagggcccagccatatgtgg 737
Query: 121 atatggacccttagtctctagaacattctagcccctgatgtaattcacctatgggcccaa 180
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 736 atatggacccgtagtctctagaacattctagcccctgatgtaattcaccgatgggcccaa 677
Query: 181 atctggaaggaactatgagagctttgaatgacaaggacactgggtctcaggcctgactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 atctggaaggaactatgagagctttgaatgacaaggacactgggtctcaggcctgactgg 617
Query: 241 aaagagcttccccagggcaggtgagaatcccattccagtgagtgttgtgggaaggagctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaagagcttccccagggcaggtgagaatcccattccagtgagtgttgtgggaaggagctg 557
Query: 301 tctggtcactctggaagcaggatatcatttcaccaatgctagacgaggtgagtccttggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tctggtcactctggaagcaggatatcatttcaccaatgctagacgaggtgagtccttggc 497
Query: 361 tgcccgacagggcataatggctcttgcttcgtgtatggtgataaaggcagagagaaatta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgcccgacagggcataatggctcttgcttcgtgtatggtgataaaggcagagagaaatta 437
Query: 421 agcctgggcagatctgtgtctcctgtagcagccacagttgctgaatctgccatttttgag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agcctgggcagatctgtgtctcctgtagcagccacagttgctgaatctgccatttttgag 377
Query: 481 aaagtgaaattccagtcccctgacttcccgtggctaggctatcaggacatgctgaggggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaagtgaaattccagtcccctgacttcccgtggctaggctatcaggacatgctgaggggt 317
Query: 541 gtcagctgacctctctggcttcttggtagaaaatggaattctgtgtaaaccctgtctatg 600
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 316 gtcagctgacctctctggcttcttggtagaaaatggaattctgtttaaaccctgtctatg 257
Query: 601 ccactgtagccaatctggtctggatgcacctgaactttggggtgagtaaagctagg 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ccactgtagccaatctggtctggatgcacctgaactttggggtgagtaaagctagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
