Query= MSMg01no496_f18.b1 MSMg01no496_f18.b1 CHROMAT_FILE:
MSMg01no496_f18.b1 PHD_FILE: MSMg01no496_f18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:40 2005
(551 letters)
>mm_chr2_47643405_47644355
Length = 951
Score = 1035 bits (535), Expect = 0.0
Identities = 547/551 (99%)
Strand = Plus / Plus
Query: 1 ctcattattaaaacatatttaagaagagaagcattgtctgtctgtaaatacatcattgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcattattaaaacatatttaagaagagaagcattgtctgtctgtaaatacatcattgga 260
Query: 61 aaaataaagataatggtatcatcagagtgaacgttaagcagaatagtagtaggtttagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaataaagataatggtatcatcagagtgaacgttaagcagaatagtagtaggtttagtt 320
Query: 121 tcttttaagccctaagttattaaatgttaatgtattcccaggtggcctctttaaaatgac 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttttaagccctaaggtattaaatgttaatgtattcccaggtggcctctttaaaatgac 380
Query: 181 cattcaacaaaaccatctgggaagtctttgctttcatattagcaaggaaggaagttactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattcaacaaaaccatctgggaagtctttgctttcatattagcaaggaaggaagttactg 440
Query: 241 taggcaactctcaaatacagccctcctacaaacactggacagtccagtaagtctaaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggcaactctcaaatacagccctcctacaaacactggacagtccagtaagtctaaaaac 500
Query: 301 atgacaaaacaaaacaaaataaaagacataagcaagaaaaaacaaaaacaaacaaacaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 atgacaaaacaaaacaaaataaaagacataagcaagaaaaaacaaaaacaatcaaacaaa 560
Query: 361 acaagaaaagctcagtccctgtcactacacagaaggaagcctggatagaagttacagtta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaagaaaagctcagtccctgtcactacacagaaggaagcctggatagaagttacagtta 620
Query: 421 gagaagtctgaaagttgagagaattaagtaacaaatcaactctcataaatttgaagtttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagaagtctgaaagttgagagaattaagtaacaaatcaactctcataaatttgaagtttc 680
Query: 481 agggctttaaatacaacgtagtttataattttgtaacttgcaagtttagatatgactttc 540
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 agggctttaaatacaacatagtttataattttgtaactcgcaagtttagatatgactttc 740
Query: 541 agtttgaatgt 551
|||||||||||
Sbjct: 741 agtttgaatgt 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_f18.g1 MSMg01no496_f18.g1 CHROMAT_FILE:
MSMg01no496_f18.g1 PHD_FILE: MSMg01no496_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:21:40 2005
(510 letters)
>mm_chr2_47829005_47829912
Length = 908
Score = 913 bits (472), Expect = 0.0
Identities = 500/510 (98%), Gaps = 2/510 (0%)
Strand = Plus / Minus
Query: 1 ctgggacatgaagcaggagtgggtgggttggtgagcagaggaagggggagaagatagggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ctgggacatgaagcaggagtgggtgggttggtgagcagaggaagggggagaagatagggg 610
Query: 61 attatctgaggggaaactaggaaagaggatagcatttgaaatgtaaataaaaaaatacct 120
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 609 attttctgaggggaaactaggaaaggggatagcatttgaaatgtaaataaaaaaatacct 550
Query: 121 aataaaaattaaaataaaaaaccaagatattttgataaattttctttgccaacaaggtga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aataaaaattaaaataaaaaaccaagatattttgataaattttctttgccaacaaggtga 490
Query: 181 gggtagtgtgactgagtaattcttagttagctccaagaaggtaaaataaaagggtaagag 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 489 gggtagtgtgactgagtaattcttagttaactccaagaaggtaaaataaaagggtaagag 430
Query: 241 caatcattgaaaactcactctgaacttgcaattgagacgttttctcaccaaacttgactt 300
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 429 caatcaaggaaaactcactctgaacttgcaattga--cgttttctcaccaaacttgactt 372
Query: 301 ttttattagttttatctatgccatcttttaaaaaaaaattttattagatatttttcattt 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 371 ttttattagttttatctatgccatcttttaaaaaaaatttttattagatatttttcattt 312
Query: 361 acatttcgaatgctatcccaaaagtcccttataccttccccccaccctgattccctaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 acatttcgaatgctatcccaaaagtcccttataccttccccccaccctgattccctaccc 252
Query: 421 atccactcccagttcttggccctggagttcccctctactgtggcatataaagtttgcaag 480
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 251 atccactcccagttcttggccctggagttcccctctactgcagcatataaagtttgcaag 192
Query: 481 accaaggggcctctctttccaataatggcc 510
||||||||||||||||||||||||||||||
Sbjct: 191 accaaggggcctctctttccaataatggcc 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 908
Length adjustment: 10
Effective length of query: 500
Effective length of database: 898
Effective search space: 449000
Effective search space used: 449000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
