CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAGGAGGCCGC
GGAANNCNCAATTTCAGTATTTACAGATTTCAACCGTATGTCCTAAATGA
ACTCTGGATTTGAATAAATGTTTTCAAGATATATATGTTTTCTGTTGCTG
ATCATTCTGAATATTACTGATCCAAATTATACTTATTTAACTGAATTTTC
TAAATCCGTTTAATTTGGGGTTTTNNTTGNNNNCTTNNNNNCTTTNNNNN
NCTACTAGNATTTATAATTTTNNNTATNNNTGNNNNCNTGNNNNNNNNNN
NNNNNNNNNNNNNNNNNGTGGGGGGGGGGCTGGGGGGGTGTTGGTGTGTG
TGTTTGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNANNNNNNNNNNNNNNANNNNNNNNNNNNNNAANANNNNN
NNNNNNNNNNNNNNNNNNNNNNNATNNNNNNNNNNNNNNNNNNNNNNNNN
NNANNNNANNNANNNNNNNNNNNNNNNNANNAANNNNAAAAAAAANNNNA
NNNNNANNNTTTTTAANAAANNNAAANANNNNNNNNANANANTTTTTTTT
TTTTNNTTTTTNNANATNANNNTTANNNNNNTTANANNAAATTATTTTNA
TTATGTGTGGTGTTTT

NAACAATGCAGNTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAGTTCCCTGTCATACAGAAGCAA
TGTCTAAACTGGATGGTAGCTTCCAAAACAAAGGAGCCCTTCTATGCATC
AAAAGAAGAAATGTGAGGGAGAGTGGTTGTCTAGGAGTTTGGCTGGCAGC
TACATACAAACTTCAGAGAAACTGCTAAGTCAGGGGAAGGGAGACCTCTA
CCACAGCACCAGATAGCTCCCACTACCTGTCATTCCCTATTCAGTAAGGA
CTAACTGGTATCTCAATGTCAGGCTCAGCAATGAACACTGGGGTGTGGGG
GAACACACCTCTGCCAACAGTGCCAAGACAAATCAGCACAGCCTCTCACA
CAGCCTGGCCCACAAATCAGAAACAGAAGGACAAAGGACAAGAAAAGAGA
GAGGAGAGCTAAAACCACACCTCCTACGAGTCAGGGACAGGCTGACTCCT
CGAAGAGACAACCACTCATCAGAGCTCCCAGAGAAGTCATGCTACATCCA
TAATCCTCCTACAAAGACACACAGGCCTTTGGGCAGGCTAAATGGTCACT
CATTCATCCTGTGGCTACAGGCAAATGGAGGTGAAATCCCAGCTCTAGGT
TGTATGTTTGACCTTTAGTTTCTGAAAACAGAATTGACCTAGCCAGGCAA
CAAAGTACGTCTAATTTTACCTATGAAATGGAGACTTTTTAAAAACATAA
AAAAGAAGGGCAGGGACGAAGTGAGGCTCAT

Query= MSMg01no496_l22.g1 MSMg01no496_l22.g1 CHROMAT_FILE:
MSMg01no496_l22.g1 PHD_FILE: MSMg01no496_l22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:11 2005
         (556 letters)



>mm_chr2_49525978_49526935
          Length = 958

 Score = 1052 bits (544), Expect = 0.0
 Identities = 554/558 (99%), Gaps = 2/558 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agttccctgtcatacagaagcaatgtctaaactggatggtagcttccaaaacaaaggagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 agttccctgtcatacagaagcaatgtctaaactggatggtagcttccaaaacaaaggagc 699

                                                                       
Query: 61  ccttctatgcatcaaaagaagaaatgtgagggagagtggttgtctaggagtttggctggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 ccttctatgcatcaaaagaagaaatgtgagggagagtggttgtctaggagtttggctggc 639

                                                                       
Query: 121 agctacatac--aaacttcagagaaactgctaagtcaggggaagggagacctctaccaca 178
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 agctacatacgtaaacttcagagaaactgctaagtcaggggaagggagacctctaccaca 579

                                                                       
Query: 179 gcaccagatagctcccactacctgtcattccctattcagtaaggactaactggtatctca 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gcaccagatagctcccactacctgtcattccctattcagtaaggactaactggtatctca 519

                                                                       
Query: 239 atgtcaggctcagcaatgaacactggggtgtgggggaacacacctctgccaacagtgcca 298
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 atgtcaggcacagcaatgaacactggggtgtgggggaacacacctctgccaacagtgcca 459

                                                                       
Query: 299 agacaaatcagcacagcctctcacacagcctggcccacaaatcagaaacagaaggacaaa 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 agacaaatcagcacagcctctcacacagcctggcccacaaatcagaaacagaaggacaaa 399

                                                                       
Query: 359 ggacaagaaaagagagaggagagctaaaaccacacctcctacgagtcagggacaggctga 418
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ggacaagaaaagagagaagagagctaaaaccacacctcctacgagtcagggacaggctga 339

                                                                       
Query: 419 ctcctcgaagagacaaccactcatcagagctcccagagaagtcatgctacatccataatc 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 ctcctcgaagagacaaccactcatcagagctcccagagaagtcatgctacatccataatc 279

                                                                       
Query: 479 ctcctacaaagacacacaggcctttgggcaggctaaatggtcactcattcatcctgtggc 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ctcctacaaagacacacaggcctttgggcaggctaaatggtcactcattcatcctgtggc 219

                             
Query: 539 tacaggcaaatggaggtg 556
           ||||||||||||||||||
Sbjct: 218 tacaggcaaatggaggtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 556
Length of database: 958
Length adjustment: 10
Effective length of query: 546
Effective length of database: 948
Effective search space:   517608
Effective search space used:   517608
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)