Query= MSMg01no497_g19.b1 MSMg01no497_g19.b1 CHROMAT_FILE:
MSMg01no497_g19.b1 PHD_FILE: MSMg01no497_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:06 2005
(571 letters)
>mm_chr2_70121659_70122628
Length = 970
Score = 1073 bits (555), Expect = 0.0
Identities = 567/571 (99%), Gaps = 1/571 (0%)
Strand = Plus / Plus
Query: 1 gacaacaccagtaaataaacaaacaacaccacacaggcaagcacagggcccacacctgta 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 gacaacaccagtaaataaacaaacaacaccacaccggcaagcacagggcccacacctgta 260
Query: 61 atcccagccccaaagccacagacacaggaccagtctgcattcaagactagcctgtgctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcccagccccaaagccacagacacaggaccagtctgcattcaagactagcctgtgctag 320
Query: 121 tgaaacttccttaaaaaacaaagcaaaaccagaaaagttatcatttgggctccgtttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaacttccttaaaaaacaaagcaaaaccagaaaagttatcatttgggctccgtttcat 380
Query: 181 ctaaggggacacagggcactggatgaagctgggctttgtaggatataaaatgattactgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctaaggggacacagggcactggatgaagctgggctttgtaggatataaaatgattactgt 440
Query: 241 gtgtttgtcttctgtcataaagtttctggtttagagccccatttcaaaagacagacttgg 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtttgtcaactgtcataaagtttctggtttagagccccatttcaaaagacagacttgg 500
Query: 301 gacatgggaaactgtgtctaatcagccaggcagagatactcagagtacaaaatgtagcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacatgggaaactgtgtctaatcagccaggcagagatactcagagtacaaaatgtagcaa 560
Query: 361 cccttgttgtttcagatccttcttggtggcctatgcagcatcctcccttgtgatgtaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccttgttgtttcagatccttcttggtggcctatgcagcatcctcccttgtgatgtaagc 620
Query: 421 taagacacctgcatgccttcaagggggtagggaggtcagagagagcaacctgccctggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taagacacctgcatgccttcaagggggtagggaggtcagagagagcaacctgccctggct 680
Query: 481 ttatgaaatgcttcagagaagaaaaacaaaaggctagagaggccttcctgcttctgctgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatgaaatgcttcagagaagaaaaacaaaaggctagagaggccttcctgcttctgctgt 740
Query: 541 ttgcacagatggtggtgggggttggggaagg 571
|||||||||||||||||||||| ||||||||
Sbjct: 741 ttgcacagatggtggtgggggt-ggggaagg 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 970
Length adjustment: 10
Effective length of query: 561
Effective length of database: 960
Effective search space: 538560
Effective search space used: 538560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_g19.g1 MSMg01no497_g19.g1 CHROMAT_FILE:
MSMg01no497_g19.g1 PHD_FILE: MSMg01no497_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:06 2005
(581 letters)
>mm_chr2_70244805_70245786
Length = 982
Score = 1106 bits (572), Expect = 0.0
Identities = 579/582 (99%), Gaps = 3/582 (0%)
Strand = Plus / Minus
Query: 1 agcgagcacggggctgatttcccacctacatcagaagaaacatgaaagagcagttcttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 agcgagcacggggctgatttcccacctacatcagaagaaacatgaaagagcagttcttaa 582
Query: 61 ttacaaccaaatattagctctggctcctgggagctcatcattccatctcaagatctatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ttacaaccaaatattagctctggctcctgggagctcatcattccatctcaagatctatat 522
Query: 121 ttatgaaaatttaagcaatgtcttaaaacatgttaatttgttctttgtttattgctttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ttatgaaaatttaagcaatgtcttaaaacatgttaatttgttctttgtttattgctttcc 462
Query: 181 ctgacagattaatttatttcaagggactttggttctcaagcgctaatatatcgattgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ctgacagattaatttatttcaagggactttggttctcaagcgctaatatatcgattgggc 402
Query: 241 ccatgtacgacatagctaacagcccggggaggagatttcgatggaaaacaaaagtctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ccatgtacgacatagctaacagcccggggaggagatttcgatggaaaacaaaagtctttc 342
Query: 301 ttgtagttttccttaggtaattaagtttgtattgtggg-tctggcatgcttccagcttcc 359
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 341 ttgtagttttccttaggtaattaagtttgtattgtgggctctggcatgcttccagcttcc 282
Query: 360 tctgcatttgcatctctggctttttgatcaatggctaatttcatgaaaggcaaggaatgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tctgcatttgcatctctggctttttgatcaatggctaatttcatgaaaggcaaggaatgc 222
Query: 420 tgggagcatagatacagataaacagacacacaaacacacacacacacatagacatacaca 479
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 221 tgggagcatagatacagataaacagacacacaa--acacacacacacatagacatacaca 164
Query: 480 cagacatacatatagacacagacacacagtcacacagacatacacatagactcagacata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 cagacatacatatagacacagacacacagtcacacagacatacacatagactcagacata 104
Query: 540 gacacacaaatacacagacacacacagacacatagacataca 581
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gacacacaaatacacagacacacacagacacatagacataca 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 982
Length adjustment: 10
Effective length of query: 571
Effective length of database: 972
Effective search space: 555012
Effective search space used: 555012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
