Query= MSMg01no497_i02.b1 MSMg01no497_i02.b1 CHROMAT_FILE:
MSMg01no497_i02.b1 PHD_FILE: MSMg01no497_i02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:13 2005
(636 letters)
>mm_chr2_97811399_97812435
Length = 1037
Score = 938 bits (485), Expect = 0.0
Identities = 604/659 (91%), Gaps = 32/659 (4%)
Strand = Plus / Plus
Query: 4 ggaattctttatttttatctgtaccccattttttaaattaaaatt---agcat---atag 57
|||||||||||||| |||||||||||| |||||| |||||| | ||| ||||
Sbjct: 204 ggaattctttatttagatctgtacccca---tttaaa--aaaatttaaaacatcacatag 258
Query: 58 ccataaacattttataatcttttaaactatactacagatttttgatccaaccttctaaaa 117
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct: 259 ccataaacattttataattttttaaactatactacagatttttgatccaaccttctagca 318
Query: 118 gcatttaagcc-tttcctgtgtagttggatggtatccaaactcatagcttttgggggctg 176
||||||||||| |||||||||||||||| ||||||||||||||||||||| |||| ||
Sbjct: 319 gcatttaagccttttcctgtgtagttggttggtatccaaactcatagcttacaggggttg 378
Query: 177 ttaccaatacacaaccttattgagagtacattgtttaaagcttattgacttattgagcat 236
||||||||| |||||||||| ||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 379 ttaccaataaacaaccttatggagggtacattgtttaaag-atattgtcttattgagcat 437
Query: 237 ttgggctagtttattttttt--------aaaattagatattttcttcatttacatttcaa 288
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 438 ttgggctagtttatttttttcttttttaaaaattagatattttcttcatttacatttcaa 497
Query: 289 atgctatcccgaaagtcccctatgccctccctctgccctgttccccaacccacccactcc 348
||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 498 atgctatcccgaaagtcccctatgccctccccctgccctgtttcccaacccacccactcc 557
Query: 349 tgctgcctggccctggcattcacctgtattggggcatatgatcttctaccccatttttaa 408
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 558 tgctgcctggccctggcattcacctttattggggcatatgatcttctaccccatttttaa 617
Query: 409 tacagttatttgactgtctcaagtctatcttcatgagttctttatatatattggatatta 468
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 618 tacagttatttgactgtctcaagtctatcttcatgaattctttatatatattggatatta 677
Query: 469 gtcctctattagatgtagggt-ggtaaagatctttccccaatctgtt----------ttg 517
|||||||||| |||||||| | ||||||||||||||||||||||||| |||
Sbjct: 678 gtcctctattggatgtaggattggtaaagatctttccccaatctgttggttgctgttttg 737
Query: 518 tcctatttacagtgttctttgccttacagaagttttgcaatcttatggggtcccatttgt 577
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcctatttacagtgttctttgccttacagaagttttgcaatcttatggggtcccatttgt 797
Query: 578 ttatttttgatctaagagcataaaccattggtgttctattcaggaaattttctcatgtg 636
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 798 ttatttttgatctaagagcataaaccattggtgttctgttcaggaaattttctcatgtg 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no497_i02.g1 MSMg01no497_i02.g1 CHROMAT_FILE:
MSMg01no497_i02.g1 PHD_FILE: MSMg01no497_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:23:13 2005
(654 letters)
>mm_chr2_97968266_97969320
Length = 1055
Score = 1181 bits (611), Expect = 0.0
Identities = 644/655 (98%), Gaps = 1/655 (0%)
Strand = Plus / Minus
Query: 1 catgtctttctctttcagcttttaacttaaaaaacagttgctggtttacaaggcctccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 catgtctttctctttcagcttttaacttaaaaaacagttgctggtttacaaggcctccaa 796
Query: 61 ccttggactgagttatgtcctggtcttatggacttgaaaggagattattatggtttttat 120
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 acttggcctgagttatgtcctggtcttatggacttgaaaggagattattatggtttttat 736
Query: 121 tatggtattatggttttcctagcttttccattttgtagacagtctatgttaggattgctt 180
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 735 tatggtattatggttttcctagtttttccattttgtagacagtctatcttaggattgctt 676
Query: 181 gtcttcatcatcatctacagagctctcccttgctaaagcattcagcttgtttttgtatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gtcttcatcatcatctacagagctctcccttgctaaagcattcagcttgtttttgtatcc 616
Query: 241 ctctatcttccaattgcctcctatccattctatctctctggataaatctgtcttactaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 615 atctatcttccaattgcctcctatccattctatctctctggataaatctgtcttacgaca 556
Query: 301 aacacaatatgacaatactaaggcagtgttactgcaaaattggatcataggataaaatct 360
||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 555 aacacaatatgacaatattaaggcagtgttactgcaaaattggatcataggagaaaatct 496
Query: 361 agttagtacctaagcttggatgatgggtcttctctacagagtagaaacatattaaagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 agttagtacctaagcttggatgatgggtcttctctacagagtagaaacatattaaagaca 436
Query: 421 caagaaaccagtaaatagtatcaaaatgacaaagaaaaggataaccaatgtacatgttcc 480
||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 435 caagaaaccagtaaatattatcaaaatgacaaagaaagggataaccaatgtacatgttcc 376
Query: 481 tttatagtaagacaaatatttacattctgtgacagattgtatttactactgaaaggctat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tttatagtaagacaaatatttacattctgtgacagattgtatttactactgaaaggctat 316
Query: 541 aaatatatttctta-tttttttttgttcaatatgttttattcactttgcaacctgagagc 599
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aaatatatttcttattttttttttgttcaatatgttttattcactttgcaacctgagagc 256
Query: 600 aatgcccttcaccttaagtgtttattaaatagtttcaactttacatatttttctt 654
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aatgcccttcaccttaagtgtttattaaatagtttcaactttacatatttttctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1055
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1045
Effective search space: 672980
Effective search space used: 672980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
