Query= MSMg01no498_j14.b1 MSMg01no498_j14.b1 CHROMAT_FILE:
MSMg01no498_j14.b1 PHD_FILE: MSMg01no498_j14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:42 2005
(598 letters)
>mm_chr2_77727205_77728202
Length = 998
Score = 1118 bits (578), Expect = 0.0
Identities = 593/598 (99%)
Strand = Plus / Minus
Query: 1 ggatgacctggtggtgagcagtactgtcccctccttactatattatgcttgcacattctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ggatgacctggtggtgagcagtactgtcccctccttactatattatgcttgcacattctc 739
Query: 61 acttgcttttgactgcaaggaggaggaggtatagtgatggctataaaaacagcaaagacc 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 acttgcttttgactgcaagtaggaggaggtatagtgatggctataaaaacagcaaagacc 679
Query: 121 tctgagtgtcttttgttcctttatggaaacatgtatatgagtaattttacatgaggataa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tctgagtgtcttttgttcctttatggaaacatgtatatgagtaattttacatgaggataa 619
Query: 181 ttgccttactagaaaccactgttctatttttataaatgacagagaacctccttcctacag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttgccttactagaaaccactgttctatttttataaatgacagagaacctccttcctacag 559
Query: 241 tattcctggtctttgaaaggtacagatgcaagagtcaattcacaaaacaaaatccacttt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tattcctgggctttgaaaggtacagatgcaagagtcaattcacaaaacaaaatccacttt 499
Query: 301 aatattaccagtaaggagggctaagtatgtattttaatttctttaaggcaggctctaggt 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 498 aatattaccagtaaggagggctaagtatgtattttaattgctttaaggcaggctctaggt 439
Query: 361 tttagagcgcattatgttaaccagtaacttattttcccatacttctgtaataagaactgc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tttagagcgcattatgttaaccagtaacttattttcccatacttctgtaataagaactgc 379
Query: 421 cgagcagtaacagactgaacattttcagtatctcacagtagaaaaatctgaaaaatccca 480
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 378 cgagcagtaacagactgaacgttttcagtatctcacagtagaaaagtctgaaaaatccca 319
Query: 481 ctccacgcatgcatgcagatattctttcttgaaacacagcgaattggtggaaagtgaatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ctccacgcatgcatgcagatattctttcttgaaacacagcgaattggtggaaagtgaatg 259
Query: 541 taccccgattcctgacgtttctgaatgcttttgtctgtcgttatacttttgtcagatg 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 taccccgattcctgacgtttctgaatgcttttgtctgtcgttatacttttgtcagatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_j14.g1 MSMg01no498_j14.g1 CHROMAT_FILE:
MSMg01no498_j14.g1 PHD_FILE: MSMg01no498_j14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:42 2005
(573 letters)
>mm_chr2_77563377_77564349
Length = 973
Score = 1079 bits (558), Expect = 0.0
Identities = 570/574 (99%), Gaps = 1/574 (0%)
Strand = Plus / Plus
Query: 1 cctagcatgtgcgaggttctagttcaaagccccttagtgcactggtacaaaacaagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctagcatgtgcgaggttctagttcaaagccccttagtgcactggtacaaaacaagcaga 260
Query: 61 agggagccctactaaagtagtcactcttctgcttcggtccagagcttgcctccagagagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agggagccctactaaagtagtcactcttctgcttcggtccagagcttgcctccagagagt 320
Query: 121 tccatgcacagctgtctcctacttcctcctccctgttgctttatgacactggattcgaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccatgcacagctgtctcctacttcctcctccctgttgctttatgacactggattcgaac 380
Query: 181 tgctgcttagggttcgatgtcgatacattgtttctccatcccatcccgtgtttctccatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctgcttagggttcgatgtcgatacattgtttctccatcccatcccgtgtttctccatg 440
Query: 241 tctttcttttatctactggcactctgctagtactggtgaggtgggctataacaggaagcc 300
|||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctttcaatcatctactggcactctgctagtactggtgaggtgggctataacaggaagcc 500
Query: 301 ccagactcatggggatcccaatagatgttggtgtcacagttgggtaagaatgacaggtgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccagactcatggggatcccaatagatgttggtgtcacagttgggtaagaatgacaggtgc 560
Query: 361 tgctgtgcttctagtagtttcttccatttcattttctaattaattaatttgcatcccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctgtgcttctagtagtttcttccatttcattttctaattaattaatttgcatcccaag 620
Query: 421 tgctgccccctatcagttcccacctcaatggggtcctcccccacccctccccttctcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgctgccccctatcagttcccacctcaatggggtcctcccccacccctccccttctcctg 680
Query: 481 tgagaggatgatgacccgtctccccccccccc-actatgctgtcacactagcacatcaag 539
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 681 tgagaggatgatgacccgtctccccccccccccactatgctgtcacactagcacatcaag 740
Query: 540 tctctgccagattaggcacatcttgagaaaaatt 573
||||||||||||||||||||||||||||||||||
Sbjct: 741 tctctgccagattaggcacatcttgagaaaaatt 774
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 973
Length adjustment: 10
Effective length of query: 563
Effective length of database: 963
Effective search space: 542169
Effective search space used: 542169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
