Query= MSMg01no498_k20.b1 MSMg01no498_k20.b1 CHROMAT_FILE:
MSMg01no498_k20.b1 PHD_FILE: MSMg01no498_k20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:49 2005
(636 letters)
>mm_chr2_131487203_131488235
Length = 1033
Score = 1139 bits (589), Expect = 0.0
Identities = 620/631 (98%), Gaps = 3/631 (0%)
Strand = Plus / Minus
Query: 6 aattccaacctactaacgaaaaaaatgtgagtgcgggaaggggaaagagagagagagaga 65
||||||||||||| || | |||||||||||||||||||||||| ||||||||| |||||
Sbjct: 833 aattccaacctacaaaag-aaaaaatgtgagtgcgggaagggg--agagagagatagaga 777
Query: 66 atctaagctaccaaatataatttttaatatcatgatccctcaatgtataggctttacaga 125
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 776 atctaagctaccaaatataatttttaatatcataatccctcaatgtataggctttacaga 717
Query: 126 gcagatgcttggatgttcacatatttgccatcagctgacatacttagtgccaaatcacct 185
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gtagatgcttggatgttcacatatttgccatcagctgacatacttagtgccaaatcacct 657
Query: 186 cctgaggagtttgcactggacatgaccttcatcatggtcatttctgagtggtaatcactg 245
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 656 cctgaggagtttgcactggacatgaccttcatcatggtcgtttctgagtggtaatcactg 597
Query: 246 aaccccacttgaataccctaagctcttactgcttcatgagaaagaccatctcatggagca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aaccccacttgaataccctaagctcttactgcttcatgagaaagaccatctcatggagca 537
Query: 306 ttctttggtatgatagattcaaactcaaagtctgctggtgaaagagccatggtgaatgtt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 ttctttggtatgatagattcaaactcaaagtctgctggtgaaagagccatggtgaatgtt 477
Query: 366 ctcagctccgtacacattttggtccagtgtctgttgctataattaaatatcacaaatgga 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ctcagctccgtacacattttggtccagtgtctgttgctataattaaatatcacaaatgga 417
Query: 426 tgaagctgagtggttcaaggtcaagggtgtccctgaagacagtttcttcgctgatgtaac 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tgaagctgagtggttcaaggtcaagggtgtccctgaagacagtttcttcgctgatgtaac 357
Query: 486 cctctacagtgtcctaggaaagcacaaaacacaatatggcatgaaagagcaagctcgatg 545
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 356 cctctacagtgtcctaggaaagcacaaagcacaatatggcatgaaagagcaagctcgatg 297
Query: 546 agttggacccttcctttctttatgaagccacaaagcagccaccatcattacctcatacag 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 agttggacccttcctttctttatgaagccacaaagcagccaccatcattacctcatacag 237
Query: 606 tcttatactaccttcagtgaccttcttcaaa 636
||||||||||||||| |||||||||||||||
Sbjct: 236 tcttatactaccttcggtgaccttcttcaaa 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1033
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1023
Effective search space: 640398
Effective search space used: 640398
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no498_k20.g1 MSMg01no498_k20.g1 CHROMAT_FILE:
MSMg01no498_k20.g1 PHD_FILE: MSMg01no498_k20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:24:49 2005
(590 letters)
>mm_chr2_131394416_131395405
Length = 990
Score = 1071 bits (554), Expect = 0.0
Identities = 581/590 (98%)
Strand = Plus / Plus
Query: 1 tccctgagccttttctctgtggatttgtctagtgattgctttgctgttctgtttactcat 60
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctgagccttttctccgtggatttgtctagtgattgctttgctgttctgtttactcac 260
Query: 61 tgtaaaatggtgataaaaatcctgcccaacaatgggattgggagtagaaaatcgcattta 120
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 261 tgtaaaatggtgataaaaatcctgcccaacaatgggattgagagtagaaaatcgtattta 320
Query: 121 cccctcacctccgagtttctgttatctttatttatctgtagaataatgtcttgtgatttc 180
||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccccttacctccgtgtttctgttatctttatttatctgtagaataatgtcttgtgatttc 380
Query: 181 attgttgacttatctagagatagtgggcttgagtgcttttcagtgatgtgacacatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgttgacttatctagagatagtgggcttgagtgcttttcagtgatgtgacacatttat 440
Query: 241 cttttaatgctcttgaatgtgctttgacagtgccagttgtctcagttgacagaagcagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttaatgctcttgaatgtgctttgacagtgccagttgtctcagttgacagaagcagaa 500
Query: 301 gttaacaagcaaacaaatgcctgaaagtgggagggactgcacacctctgagtgtaactga 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 gttaacaagcaaacaaatgcctgaaagtgggagggactgcacacctctgcgtgtaactga 560
Query: 361 gaagagctgtgtgtctgtgttctaggggctcagaccttctgccagagatgcctgaggagg 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaagagctgtgtgtctatgttctaggggctcagaccttctgccagagatgcctgaggagg 620
Query: 421 ccttgtgcaggcaggagcctgatctccctgtgacaggggagacaccattctcctagtagg 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttgtgcaggcaggatcctgatctccctgtgacaggggagacaccattctcctagtagg 680
Query: 481 agctcttggagaggtagcaacagggagttagaataggagatgctccatgttccccattct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agctcttggagaggtagcaacagggagttagaataggagatgctccatgttccccattct 740
Query: 541 aacctgggagtgacctactcatggagtggaactttgctccacatgctaca 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacctgggagtgacctactcatggagtggaactttgctccacatgctaca 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|