CGACTCACTATAGTTCGAGGATCCGCGGAATTCAGCCTTGGTTTCCATGT
TTTAAAGGGAGCAGTTAGTGAAGGGGTGGAGAGAACCCCAGTGGGAGGCT
GGGAGGAAGTGGCGGGATGCCAGACACCCCAGGAATGTCCCAGTCCCTAC
TCCCACTGAGAAAGGATTAGAAAGGATGTCTGAGCTGCCAGCAGACAGAG
CTGCAGGCACCAGTAGATCTGTGTAATCTAAAGCATTCTGGATAATTCCA
CCCTCTGTTCTAAGGATCATCTGCTGGTTTTGATGCTGTTTAGATGAGAG
GAAAGATCCTTTGCGCACAGAGCTAAGTGAGGGTTTGAGGAATATGCCAC
CCTTTTGAACATGAGCCTCCTGGGGCAGTGGGTACAAGCCCCCTCTCTGA
TGTCTTGTGTAAGCTATACTGGACTCCTGAGGTGGCAAGCCAGTTGGAAG
CAGAAAGGGAGGTGGGTGGGACACAACTCTGTCAGAGTGTCTCAGTCCAA
GCAGACTGTGAGCCTGAGAATCCAGAAGGAAATCTCTGGAACTCTAGGGA
CCTGGAGGTGTGGTAGAGAGGTAGGGACTCATGCATCCTGCACACAAGGA
ATACAGCTCGCACCCACTTCTAATGTTGGGGACTGAGGGTCTGTGGCTCA
CTGCTGAGTAAGGTTCCTTTGCATAGCACGTTACATAGTTGGTGTTTGTT
A

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTGAGACAAACTAAGCAATGCCTGAAAAAGTTATTGGCTATAC
CAATTAAAATAAGCCAACAACCCTGGTACTGATATCTGGTCCTTACAAAG
GTAGAAAACGTGTGTTCTTTCTTTGTTCTGGGTCTCTCCTCTGGCCTGCG
TGCTGAGAGGGGAGTCCCCAACATGTTGGGTCAATAAAAAAAATCCTCAT
GCGGTTCACAACGATGGTGGTCTCTGTGGTCTTTGTGAGTGAGGTTCTCT
TGACAAACTACAACGGGAATATGAAGGAGAAGGAGTCCCACAGAACACTT
AAAGGGCACATATCCAGCAATTTTTTTTTAATGCCAGGTAGACCCTGCTT
CTTAAAAGAGCCACACTGTGCAGCAGGACTTACACTCGTGGGCTTGTGGG
AGACATTTAACATCTAAAGCATGACACCCATCCAATGACTCTGTGTCTGA
GGAGGATTGATAAAAAGTACTACAAGTGTCCTTTGTCAGCTTAATGCTTG
ACTGGGTACAATTTTAAAAGGTTCAAAGTTTTATAGATTGTGAAACTCAA
GGGTAAGTTGATTGCTGGAGGCAGGTCTTGGGCTTTGCGTTGCTTGCTTG
TTTTAAAATTTGTAAAAGATTTGTTTATTTTATGTCCATGAATGTTTTGC
ATGTGTGTGCTTGCGGCCGGAAAA

Query= MSMg01no499_d23.b1 MSMg01no499_d23.b1 CHROMAT_FILE:
MSMg01no499_d23.b1 PHD_FILE: MSMg01no499_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:35 2005
         (658 letters)



>mm_chr2_28080843_28081900
          Length = 1058

 Score = 1168 bits (604), Expect = 0.0
 Identities = 625/632 (98%)
 Strand = Plus / Minus

                                                                       
Query: 27  ggaattcagccttggtttccatgttttaaagggagcagttagtgaaggggtggagagaac 86
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 ggaattcagccttggaaaccatgttttaaagggagcagttagtgaaggggtggagagaac 799

                                                                       
Query: 87  cccagtgggaggctgggaggaagtggcgggatgccagacaccccaggaatgtcccagtcc 146
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 cccagtgggaggctgggaggaagtggcgggatgccagacaccccaggaatgtcccagtcc 739

                                                                       
Query: 147 ctactcccactgagaaaggattagaaaggatgtctgagctgccagcagacagagctgcag 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ctactcccactgagaaaggattagaaaggatgtctgagctgccagcagacagagctgcag 679

                                                                       
Query: 207 gcaccagtagatctgtgtaatctaaagcattctggataattccaccctctgttctaagga 266
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gcaccagtagatctgtgtaatctaaagcattctggataattccaccctctgttctaagga 619

                                                                       
Query: 267 tcatctgctggttttgatgctgtttagatgagaggaaagatcctttgcgcacagagctaa 326
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 618 tcatctgctggttttgatgctgtttagatgagaggaaagagcctttgcgcacagagctaa 559

                                                                       
Query: 327 gtgagggtttgaggaatatgccacccttttgaacatgagcctcctggggcagtgggtaca 386
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gtgagggtttgaggaatatgccacccttttgaacatgagcctcctggggcagtgggtaca 499

                                                                       
Query: 387 agccccctctctgatgtcttgtgtaagctatactggactcctgaggtggcaagccagttg 446
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agccccctctctgatgtcttgtgtaagctatactggactcctgaggtggcaagccagttg 439

                                                                       
Query: 447 gaagcagaaagggaggtgggtgggacacaactctgtcagagtgtctcagtccaagcagac 506
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaagcagaaagggaggtgggtgggacacaactctgtcagagtgtctcagtccaagcagac 379

                                                                       
Query: 507 tgtgagcctgagaatccagaaggaaatctctggaactctagggacctggaggtgtggtag 566
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 378 tgtgagcctgagaatccagaaggagatctctggaactctagggacctggaggtgtggtag 319

                                                                       
Query: 567 agaggtagggactcatgcatcctgcacacaaggaatacagctcgcacccacttctaatgt 626
           |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 318 agaggtagggactcatgcatcccgcacacaagaaatacagctcgcacccacttctaatgt 259

                                           
Query: 627 tggggactgagggtctgtggctcactgctgag 658
           ||||||||||||||||||||||||||||||||
Sbjct: 258 tggggactgagggtctgtggctcactgctgag 227


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)