MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-499G16
Chromosome	2 (Build37)
Map Location	10,572,068 - 10,572,737
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100040566, Gata3, LOC100040768, 4930412O13Rik, Taf3, Atp5c1, Kin, Itih2, Itih5, Sfmbt2
Downstream gene	LOC100040690, LOC100040703, LOC667192, Prkcq, LOC100040733, LOC100040898, LOC667211, Pfkfb3, Rbm17, Il2ra
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040566 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Gata3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14462 MGI:95663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040768 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs

name	4930412O13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381347 MGI:1921185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs

name	Taf3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209361 MGI:2388097
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp5c1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11949 MGI:1261437
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16588 MGI:96676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16425 MGI:96619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itih5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209378 MGI:1925751
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sfmbt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:353282 MGI:2447794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040690 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040690
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100040703 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC667192 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins pseudo : _no_value

name	Prkcq (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18761 MGI:97601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040733 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	LOC100040898 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 133 mRNAs, 3939 ESTs, 23 Proteins

name	LOC667211 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667211
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 Proteins pseudo : _no_value

name	Pfkfb3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:170768 MGI:2181202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76938 MGI:1924188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il2ra (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16184 MGI:96549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040566 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248872 GeneID:100040566
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Ubtf protein transcript_id : XM_001474917.1

name	Gata3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254638 GeneID:14462 MGI:95663
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GATA binding protein 3 transcript_id : NM_008091.2

name	LOC100040768 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248888 GeneID:100040768
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 12 ESTs product : similar to Ubtf protein transcript_id : XM_001475284.1

name	Taf3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362642 GeneID:209361 MGI:2388097
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_027748.2

name	Atp5c1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368640 GeneID:11949 MGI:1261437
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1 transcript_id : NM_020615.3

name	Kin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130378 GeneID:16588 MGI:96676
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : antigenic determinant of rec-A protein transcript_id : NM_025280.2

name	Itih2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803557 GeneID:16425 MGI:96619
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha trypsin inhibitor, heavy chain 2 transcript_id : NM_010582.2

name	Itih5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124286821 GeneID:209378 MGI:1925751
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inter-alpha (globulin) inhibitor H5 transcript_id : NM_172471.2

name	Sfmbt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142348084 GeneID:353282 MGI:2447794
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Scm-like with four mbt domains 2 transcript_id : NM_177386.4

name	Prkcq (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130636 GeneID:18761 MGI:97601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C, theta transcript_id : NM_008859.2

name	LOC100040733 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248884 GeneID:100040733
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : similar to pol protein transcript_id : XM_001475160.1

name	LOC100040898 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248896 GeneID:100040898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 92 mRNAs, 1945 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 2 transcript_id : XM_001475541.1

name	LOC100040898 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248894 GeneID:100040898
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 133 mRNAs, 3938 ESTs, 23 Proteins product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), transcript variant 1 transcript_id : XM_001475515.1

name	Pfkfb3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87298846 GeneID:170768 MGI:2181202
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 3 transcript_id : NM_133232.2

name	Rbm17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22779923 GeneID:76938 MGI:1924188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 17 transcript_id : NM_152824.1

name	Il2ra (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34556198 GeneID:16184 MGI:96549
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 2 receptor, alpha chain transcript_id : NM_008367.2

name	LOC100040566 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248873 GeneID:100040566
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474967.1

name	Gata3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679951 CCDS:CCDS15674.1 GeneID:14462 MGI:95663
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001709 - cell fate determination [Evidence IDA]; GO:0042421 - norepinephrine biosynthesis [Evidence IMP]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0042035 - regulation of cytokine biosynthesis [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0048485 - sympathetic nervous system development [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : GATA-binding protein 3 product : GATA binding protein 3 protein_id : NP_032117.1

name	LOC100040768 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248889 GeneID:100040768
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475334.1

name	Taf3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:74315971 CCDS:CCDS15675.1 GeneID:209361 MGI:2388097
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005669 - transcription factor TFIID complex [Evidence ISS] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence TAS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence TAS] codon_start : 1 exception : mismatches in translation note : RNA polymerase II transcription factor, TFIID subunit; TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 140kDa product : TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_id : NP_082024.1

name	Atp5c1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11602916 GeneID:11949 MGI:1261437
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0015078 - hydrogen ion transporter activity [Evidence IEA]; GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0006754 - ATP biosynthesis [Evidence IEA]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0015992 - proton transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ATP synthase gamma-subunit gene encoding a mitochondrial protein; F1 gamma product : ATP synthase, H+ transporting, mitochondrial F1 complex, gamma subunit protein_id : NP_065640.1

name	Kin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859684 CCDS:CCDS15676.1 GeneID:16588 MGI:96676
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : KIN, antigenic determinant of recA protein homolog product : antigenic determinant of rec-A protein protein_id : NP_079556.1

name	Itih2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754384 CCDS:CCDS15677.1 GeneID:16425 MGI:96619
definition	GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 product : inter-alpha trypsin inhibitor, heavy chain 2 protein_id : NP_034712.1

name	Itih5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369644 CCDS:CCDS15678.1 GeneID:209378 MGI:1925751
definition	GO_function : GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0030212 - hyaluronan metabolism [Evidence IEA] codon_start : 1 note : inter-alpha trypsin inhibitor heavy chain precursor 5 product : inter-alpha (globulin) inhibitor H5 protein_id : NP_766059.1

name	Sfmbt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:91206402 GeneID:353282 MGI:2447794
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 note : Scm-related gene containing four mbt domain 2 product : Scm-like with four mbt domains 2 protein_id : NP_796360.2

name	Prkcq (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679353 CCDS:CCDS15682.1 GeneID:18761 MGI:97601
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0001772 - immunological synapse [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004697 - protein kinase C activity [Evidence IDA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS]; GO:0007242 - intracellular signaling cascade [Evidence IMP]; GO:0045086 - positive regulation of interleukin-2 biosynthesis [Evidence IMP]; GO:0050870 - positive regulation of T cell activation [Evidence IMP]; GO:0042102 - positive regulation of T cell proliferation [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA] codon_start : 1 note : PKC theta product : protein kinase C, theta protein_id : NP_032885.1

name	LOC100040733 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248885 GeneID:100040733
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001475210.1

name	LOC100040898 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248895 GeneID:100040898
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 1 protein_id : XP_001475565.1

name	LOC100040898 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248897 GeneID:100040898
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) isoform 2 protein_id : XP_001475591.1

name	Pfkfb3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87298847 CCDS:CCDS15683.1 GeneID:170768 MGI:2181202
definition	codon_start : 1 note : inducible 6-phosphofructo-2-kinase; 6-phosphofructo-2-kinase/fructose-2,6-biphosphata se 3 product : 6-phosphofructo-2-kinase/fructose-2, 6-biphosphatase 3 protein_id : NP_573495.2

name	Rbm17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22779924 CCDS:CCDS15684.1 GeneID:76938 MGI:1924188
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence TAS] [Evidence IEA] GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0031202 - RNA splicing factor activity, transesterification mechanism [Evidence TAS] GO_process : GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0008380 - RNA splicing [Evidence TAS] codon_start : 1 product : RNA binding motif protein 17 protein_id : NP_690037.1

name	Il2ra (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34556199 CCDS:CCDS15685.1 GeneID:16184 MGI:96549
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA] GO_function : GO:0019976 - interleukin-2 binding [Evidence IPI]; GO:0004911 - interleukin-2 receptor activity [Evidence IMP]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006924 - activated T cell apoptosis [Evidence IMP]; GO:0050728 - negative regulation of inflammatory response [Evidence IMP]; GO:0042130 - negative regulation of T cell proliferation [Evidence IMP]; GO:0042104 - positive regulation of activated T cell proliferation [Evidence IMP]; GO:0043065 - positive regulation of apoptosis [Evidence IMP]; GO:0043029 - T cell homeostasis [Evidence IMP] codon_start : 1 exception : mismatches in translation note : IL-2R alpha chain; p55 chain product : interleukin 2 receptor, alpha chain protein_id : NP_032393.2

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 3 pseudo : _no_value

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 2 pseudo : _no_value

name	LOC100040690 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040690
definition	number : 1 pseudo : _no_value

name	LOC100040703 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040703
definition	number : 1 pseudo : _no_value

name	LOC100040703 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040703
definition	number : 2 pseudo : _no_value

name	LOC667211 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667211
definition	number : 1 pseudo : _no_value

name	4930412O13Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149248886 GeneID:381347 MGI:1921185
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 ESTs product : RIKEN cDNA 4930412O13 gene transcript_id : XR_035727.1

name	LOC667192 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248893 GeneID:667192
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins product : similar to zinc finger and BTB domain containing 2 pseudo : _no_value transcript_id : XR_032260.1

clone name	MSMg01-367L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522N22
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504L24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-397N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500M13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-147D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545L21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-072P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-090P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123I05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-499G16.T7 (MSMg01no499_g16.b1)	MSMg01-499G16.TJ (MSMg01no499_g16.g1)
ACC	AG575503	AG575504
length	731	756
length of high quality (start - end)	582 (69 - 650)	665 (74 - 738)
definition	CHROMAT_FILE: MSMg01no499_g16.b1 PHD_FILE: MSMg01no499_g16.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:25:47 2005	CHROMAT_FILE: MSMg01no499_g16.g1 PHD_FILE: MSMg01no499_g16.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 20:25:47 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXTTTTCAAAAACGCGGAATTCAAATTT AAGTTTACCAAAAAGAGGAGTTAGAGTTCAGTATGCGATTCATGTGATGC CCACCAAGAATGTGCAGGTGTGTATAGTTGTGTCCATATTCACTTCTGTA TATGAAAATGCATATACTCACATGCAAACATACTCCCTCGAATGGCCCGA GCTATGACTCAGTTAGGAGGTGAATACTCTTGCCAGCATCATGAGGATTA GTAGTTCACATTCATGTTTAACTTTATGATGAGTTAGAGATCAGCCCGGA ATTCATGTGATTTTCCCTGNGTTTGTGTTTATGTGTATAGGGAAGTATGC CTGTACATGCGCGTATATGAAAATGCATATATATATATATATATATATAT ATATATATATATATACACACACCCACACAACTAGGGACACATACATGTGC ACACAAACACACATGGCAGTCATCCATTTGATTTATACGTGCTTATAGTT TCATTGAGTGTATATTCATGGTATAGGGAATAATCTCACTTATCAGATGA AAACCACTTGCCAGAGTTAGGAGTCTCAGGAGTTCAAATTCATGCTTAAC TTCATAATGAGTTAGAGATCACCCTGTATTTGTGTGATGAATCCTAGGTA TGCACAAGTGCATATAATTGTGTGTGCAAGTACATGTGTGTATATGATCA TACATATAAATACACACACATTACAATGTAN	CAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXCATTTCCATAAAACTCCACATCAGCAG GTTTCTGAGGGTGATTTTTTTTTGTATCTTGCAGCTAGCTTTTATAATAA AAATGCATAATCAAATGGAATAACAAGGTTGCAGAGAACATAAATAATGA GCATGAAGGAAAACCCCATTTCAAACTGTGTAACATCAGCAAAAACTCCA GTTCTCTCTACAGGTTTCCATAAAAATTACAAGTGGCTTTTATGCATCAA ACAAGGATACGTAAGAATGTGATATCTCTATATTGAATATTGTTAGAATA ATCGTAAGGCTGTGTTTGTTATCCACCCAGCTCGAGGAATGGTTGGTGGG ACTCTTCCACAATCAATTCCTCAGAAAGTTGCAATCACCACATGTAACAG TGGCTCTTCCAGGGTCTCTGATCTACGAATGGAAAGCTAAGAAAAATGCT GTTGTCGTAACCCATCAAAGCCCCAAGAGTTAACCAGGGCTCTTTAGGCT TTAGGGGTGTGGTAGAAAGAGAGATTTTTTTGTATCACTAAAGAAGTATG ATATGTTTAGATAAAAGTTTGCTCGTCTTTGTTTTCTGTTACTAACATGT GTGTTTGATTCTCATCCTGTGTGTGTTCCTATTAGATTTAATCAAGCTGT CATTGCCCCACCTTCACCTATACCCATCTTTAAAAAGAATTACTGCTCAA TTTTAC
quality values	Open. Hide. 10 10 21 13 13 13 19 21 15 12 10 12 14 22 37 28 28 28 28 25 19 19 13 10 10 7 7 6 6 6 9 10 12 12 12 11 11 11 21 21 29 25 37 33 33 33 33 41 35 25 14 9 9 9 7 6 6 6 6 6 10 13 15 12 12 11 12 12 19 19 28 28 48 48 53 57 53 53 53 50 50 50 57 59 59 57 57 53 47 47 47 47 47 51 68 68 68 68 68 68 68 68 68 68 57 44 32 18 14 24 19 28 25 32 21 13 13 15 28 41 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 68 68 57 57 47 47 43 47 47 57 57 57 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 57 48 32 24 12 11 12 11 11 11 12 17 34 44 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 59 59 59 59 59 57 57 57 57 53 53 50 50 50 50 47 47 44 27 27 9 9 9 9 9 3 0 3 12 27 27 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 47 47 32 32 30 30 28 30 28 41 39 46 46 54 54 57 59 59 59 57 68 68 57 57 57 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 52 52 52 52 52 52 52 52 52 52 52 57 59 59 68 68 68 68 68 68 57 57 57 57 57 54 54 54 57 57 57 57 57 57 52 52 52 52 57 59 59 59 59 59 59 57 57 57 57 57 57 57 52 57 57 57 54 54 57 57 57 57 57 54 54 57 59 59 59 59 57 57 59 57 57 57 57 59 54 54 54 57 57 48 54 54 57 59 57 57 57 59 59 59 59 59 59 57 43 43 39 44 44 54 54 59 59 59 59 59 59 54 54 54 54 59 59 59 59 57 57 57 48 48 40 40 30 30 17 30 30 57 47 47 39 39 39 33 37 37 37 37 37 39 39 35 35 28 23 22 23 23 34 34 42 50 41 43 43 36 31 33 34 33 36 43 43 47 50 50 47 57 48 48 48 48 47 48 46 46 43 43 43 47 43 43 43 47 46 59 59 59 59 59 59 41 41 15 21 15 28 28 37 37 41 39 39 35 37 35 36 36 39 39 39 34 34 28 32 31 37 39 41 35 31 30 34 35 31 24 19 17 20 20 20 22 19 19 17 17 22 24 30 31 30 30 22 24 14 14 14 26 28 36 36 36 30 30 25 21 21 19 29 24 25 31 37 37 30 30 30 32 36 43 43 43 43 43 39 39 35 35 35 37 37 39 34 34 28 24 22 30 34 34 21 19 15 15 15 24 21 21 16 11 12 16 16 17 15 8 8 3 0	Open. Hide. 11 11 11 10 10 10 9 9 22 16 19 10 11 9 9 11 11 21 21 39 41 42 47 47 50 50 47 41 25 25 9 9 6 6 7 7 6 6 8 6 6 6 8 7 12 12 11 21 21 30 33 33 50 50 50 47 47 27 21 9 10 9 10 9 9 9 9 9 10 9 9 10 15 18 20 25 33 33 33 33 36 36 36 57 53 53 53 53 53 53 53 47 47 47 47 43 43 53 53 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 50 57 68 50 51 50 50 50 50 57 57 57 50 50 51 50 50 50 68 68 59 59 59 59 59 59 59 59 59 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 57 57 57 57 53 53 50 53 53 53 57 59 59 59 59 53 50 50 50 50 47 32 21 13 8 8 8 8 8 8 9 11 16 22 34 39 59 59 59 59 59 59 59 57 57 57 53 53 53 57 57 53 57 57 57 57 57 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 57 57 57 68 68 68 68 68 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 57 57 57 57 57 59 59 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 57 57 54 52 52 52 52 54 59 59 59 57 57 52 52 52 57 52 57 57 54 57 57 57 52 52 48 57 57 57 57 57 57 47 47 35 35 43 59 59 59 47 35 35 42 59 59 59 48 44 44 43 43 43 43 43 59 59 59 57 57 44 44 39 44 44 57 59 59 57 57 48 48 43 47 43 43 43 43 37 42 59 59 59 48 43 42 42 42 48 48 48 43 47 43 39 39 43 31 31 23 28 28 43 43 48 48 48 39 39 39 39 28 23 14 14 21 28 34 34 28 25 25 32 32 26 25 18 18 19 24 24 30 31 33 35 28 31 23 26 28 28 25 28 28 27 25 14 14 14 24 24 31 35 35 31 24 30 18 18 18 20 20 28 28 30 28 37 28 35 30 24 26 15 15 11 15 15 34 34 30 30 28 27 27 37 37 43 30 30 30 37 37 37 32 28 20 27 15 15 15 21 24 25 28 28 22 25 25 30 30 30 25 25 18 23 23 34 31 31 26 26 26 25 25 12 11 12 11 11 11 20 24 32 30 17 17 9 9 9 12 15 21 24 22 18

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no499_g16.g1 MSMg01no499_g16.g1 CHROMAT_FILE:
MSMg01no499_g16.g1 PHD_FILE: MSMg01no499_g16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:47 2005
         (665 letters)



>mm_chr2_10571868_10572937
          Length = 1070

 Score = 1181 bits (611), Expect = 0.0
 Identities = 654/671 (97%), Gaps = 7/671 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   catttccataaaactccacatcagcaggtttctgagggtga-tttttttttgtatcttgc 59
           ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 870 catttccataaaactccacatcagcaggtttctgatggtgattttttttttgtatcttgc 811

                                                                       
Query: 60  agctagcttttataataaaaatgcataatcaaatggaataacaaggttgcagagaacata 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 agctagcttttataataaaaatgcataatcaaatggaataacaaggttgcagagaacata 751

                                                                       
Query: 120 aataatgagcatgaaggaaaaccccatttcaaactgtgtaacatcagcaaaaactccagt 179
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 750 aataatgagcatgaaggaaaaccccatttcaaagtgtgtaacatcagcaaaaactccagt 691

                                                                       
Query: 180 tctctctacaggtttccataaaaattacaagtggcttttatgcatcaaacaaggatacgt 239
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 690 tctctctacaggtttccataaaaattacaagtggcttttatgcatcaaacaaggatacat 631

                                                                       
Query: 240 aagaatgtgatatctctatattgaatattgttagaataatcgtaaggctgtgtttgttat 299
           |||||||||||| | ||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 630 aagaatgtgata-ccctagattgaatattattagaataatcgtaaggctgtgtttgttat 572

                                                                       
Query: 300 ccacccagctcgaggaatggttggtgggactcttccacaatcaattcctcagaaagttgc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ccacccagctcgaggaatggttggtgggactcttccacaatcaattcctcagaaagttgc 512

                                                                       
Query: 360 aatcaccacatgtaacagtggctcttccagggtctctgatctacgaatggaaagctaaga 419
           ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 511 aatcaccacatgtaacagtggctcttccagggtctctgatctatgagtggaaagctaaga 452

                                                                       
Query: 420 aaaatgctgttgtcgtaacccatcaaagccccaagagttaaccagggctctttaggcttt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaaatgctgttgtcgtaacccatcaaagccccaagagttaaccagggctctttaggcttt 392

                                                                       
Query: 480 aggggtgtggtagaaagagaga-----tttttttgtatcactaaagaagtatgatatgtt 534
           ||||||||||||||||||||||     |||||||||||||||||||||| ||||||||||
Sbjct: 391 aggggtgtggtagaaagagagattttttttttttgtatcactaaagaagcatgatatgtt 332

                                                                       
Query: 535 tagataaaagtttgctcgtctttgttttctgttactaacatgtgtgtttgattctcatcc 594
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tagataaaagtttgctcatctttgttttctgttactaacatgtgtgtttgattctcatcc 272

                                                                       
Query: 595 tgtgtgtgttcctattagatttaatcaagctgtcattgccccaccttcacctatacccat 654
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgtgtgtgttcctattagatttaatcaagctgtcattgccccaccttcacctatacccat 212

                      
Query: 655 ctttaaaaaga 665
           |||||||||||
Sbjct: 211 ctttaaaaaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1070
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1060
Effective search space:   694300
Effective search space used:   694300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information