GGGGTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGNAAATCCG
CGGAATTCTTTGTGTGTAACTAATGATTTGATAGATTCCACCTCCTCCTA
TCCTCTCTCCTCTAACTCTACCCCTATCCCTGGCCCCCCTCACACACACA
CACTACTATCCCCTCCCAATCTCATGGTTCCTGGTTTTGTTCGTCTTTAA
ATCCAGGGAATCCATGCACTGTTGCCAGCATGTGCGTGCCTTAGGGGCAT
GTACTGGAGCATGGGTTTCCTCTCCGGGGCTGCACTGCTTAAGAGAATTG
ACGGTCCTCCCAGAAGGCATCCGTTGTTATATCTCCTGAGGAAAGGTGGG
TGTTCCTGATAAGCACACCTGTGCATTCTGGGATGCAGGCTTTGTGCAAA
TGATCACTGCCACTGTTAAGTCACGTGCAAGTGCCTCGTTTCCAGAAGAC
ACTGTTTTGCTATATTCGTCCATCACCACTGGCTCTCTCCTCCTCTTCCC
CAGTAATCTCCTGAGCCTTGGGAGAAAGGGGTGTAATATAGAGGTTCCAT
TTTGGGCCCTGTACTCCACAAACTCTTATTCTCTGCAGGTTGACCAAATG
AGGGTCTCTATGTTAATCAATATCTACTGTGAAGAGAAGTTTCTCTGATG
AGGGTTAAGAAATTCACTTATCTATGGTTATAACAATAAGTCTTTAGGAG
TTGGTTTAATGCTATGTCCATTTAGCAGAATGATTCCCAATAGGCTGTCT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGGCTAGCCAGTGCTACACAGAGA
AACCTTATTTTGAAAAACAAAACAAAATAATAATAATAATAATAATAATA
ATATTATTATTATTATTATTATTAATAATAATAATATAAAGAAGTTCAGT
GTGTGGAATGAAGAAATGACAGAGATGGAGAGACGGAGGAGGAGGAGGAG
GCCGTATGAGGAGGCTGCCATCTGATACTGAAAGGCTCAGGTTGTATGGT
AAGGTGGGGGGATTTACCCTGAGAGCCAGCAAATGTTAGTAAAGGATTAG
CATGATTGACCTTGGTTTGAAGGGATACTAACTGCACAGGCGGTGCAGAT
GATAGGCTGGGGCATGAAGAGATTGTTTACTTTAGAATAGTGGTGCAGGC
TGGCACCCAGGTCATCCAGTCGCTGGGAGACTGAGGGAGAGTCCCACAAG
TCTAAAGCCGGCATGGGTTACACAGCAAGGCTCTATATCAAAATAATAGC
TAATAACAAATACAGTGAAATAAATAATTCACAAAAGACTCTGTAGAAGG
TAGTGGCATTGGAGGCTTAAACTCCGATAATCTGGGGCAAATTTTCAGTG
TGACTAAAGGATAACAGAATTAAGGTGAAGAATGAGTGGGGGAAGGNTTA
GAGGGATTGCTAGCTTAGGGAATTGGGTCAATGCTGGAGTGCCTAACTAC
A

Query= MSMg01no499_g18.g1 MSMg01no499_g18.g1 CHROMAT_FILE:
MSMg01no499_g18.g1 PHD_FILE: MSMg01no499_g18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:48 2005
         (598 letters)



>mm_chr2_59967964_59968961
          Length = 998

 Score = 1029 bits (532), Expect = 0.0
 Identities = 586/610 (96%), Gaps = 12/610 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggctagccagtgctacacagagaaaccttattttgaaaaacaaaacaaaataataata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 caggctagccagtgctacacagagaaaccttattttgaaaaacaaaacaaaataataata 248

                                                                       
Query: 61  -----a-taa------taataataataatattattattattattattattaataataata 108
                | |||      || |||||||||||||||||  |||| || || |||||||||||
Sbjct: 249 ttattattaacattattattaataataatattattaacattaataataataataataata 308

                                                                       
Query: 109 atataaagaagttcagtgtgtggaatgaagaaatgacagagatggagagacggaggagga 168
           ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 309 atataaagaagttcagtgtgtggaatgaagaaatgacagagatggagagactgcggagga 368

                                                                       
Query: 169 ggaggaggccgtatgaggaggctgccatctgatactgaaaggctcaggttgtatggtaag 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggaggaggccgtatgaggaggctgccatctgatactgaaaggctcaggttgtatggtaag 428

                                                                       
Query: 229 gtggggggatttaccctgagagccagcaaatgttagtaaaggattagcatgattgacctt 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gtggggggatttaccctgagagccagcaaatgttagtaaaggattagcatgattgacctt 488

                                                                       
Query: 289 ggtttgaagggatactaactgcacaggcggtgcagatgataggctggggcatgaagagat 348
           ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 489 ggtttgaagggatactaaccgcacaggcggtgcagatgataggctggagcatgaagagat 548

                                                                       
Query: 349 tgtttactttagaatagtggtgcaggctggcacccaggtcatccagtcgctgggagactg 408
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 549 tgtttactttagaatagtggtgcaggccggcacccaggtcatccagtcgctgggagactg 608

                                                                       
Query: 409 agggagagtcccacaagtctaaagccggcatgggttacacagcaaggctctatatcaaaa 468
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agggagagtcccacaagtctaaagccggcatgggttacacagcaaggctctatatcaaaa 668

                                                                       
Query: 469 taatagctaataacaaatacagtgaaataaataattcacaaaagactctgtagaaggtag 528
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 taataactaataacaaatacagtgaaataaataattcacaaaagactctgtagaaggtag 728

                                                                       
Query: 529 tggcattggaggcttaaactccgataatctggggcaaattttcagtgtgactaaaggata 588
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tggcattggaggcttaaactccgataatctggggcaaattttcagtgtgactaaaggata 788

                     
Query: 589 acagaattaa 598
           ||||||||||
Sbjct: 789 acagaattaa 798


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space:   580944
Effective search space used:   580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)