Query= MSMg01no499_n08.b1 MSMg01no499_n08.b1 CHROMAT_FILE:
MSMg01no499_n08.b1 PHD_FILE: MSMg01no499_n08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:19 2005
(238 letters)
>mm_chr2_68294640_68295278
Length = 639
Score = 422 bits (218), Expect = e-122
Identities = 233/238 (97%), Gaps = 1/238 (0%)
Strand = Plus / Plus
Query: 1 attactctaaaattagtttgtgtgtttgtttgctctacgcca-ttacatgtgatagccct 59
|||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||
Sbjct: 201 attactctaaaattagtttgtgtgtttgtttgttctacgcaaattacatgtgatagccct 260
Query: 60 aaatgggggtggaaaaaagcaattcctaaaaatatcaattcacacttttccccccagttt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgggggtggaaaaaagcaattcctaaaaatatcaattcacacttttccccccagttt 320
Query: 120 cagtttctgatttgtacctatcttgccaacaccaaacttcaaacagtgccttttggtcca 179
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 321 cagtttctgatttgtacctatcttgccaacaccaaacttcaaacagtgccctctggtcca 380
Query: 180 gagtgatacggtgactggtgactggtccccacttttccttgtctgtgttacccaaggt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtgatacggtgactggtgactggtccccacttttccttgtctgtgttacccaaggt 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 238
Length of database: 639
Length adjustment: 9
Effective length of query: 229
Effective length of database: 630
Effective search space: 144270
Effective search space used: 144270
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no499_n08.g1 MSMg01no499_n08.g1 CHROMAT_FILE:
MSMg01no499_n08.g1 PHD_FILE: MSMg01no499_n08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:19 2005
(293 letters)
>mm_chr2_68438308_68439000
Length = 693
Score = 536 bits (277), Expect = e-157
Identities = 289/293 (98%)
Strand = Plus / Minus
Query: 1 acagacagacagatagacatataacaaatatgtatatatagatgatatgaatgtagaaat 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 493 acagacagacagatagacatataacaaatatgtagatatagatgatatgaatgtagaaat 434
Query: 61 actcaaatgtctgtaattattctatgccgccaaatatttctactccattgcaaattttga 120
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 433 actcaaatgtctgtaattattctatgttgccaaatatttctactccattgcaaattttga 374
Query: 121 ggacattcttttagcttttggtgtaagtgttctgctctaagttgctacaaagctgaacaa 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggacattcttttagcttttgttgtaagtgttctgctctaagttgctacaaagctgaacaa 314
Query: 181 taataatgagtaagagaaggtctgaggagtaacacacacacagaggcctgtgcaatatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 taataatgagtaagagaaggtctgaggagtaacacacacacagaggcctgtgcaatatca 254
Query: 241 atggggaaatcctgggatgttcccagagtgtaaaggaaggaagccatggagca 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 atggggaaatcctgggatgttcccagagtgtaaaggaaggaagccatggagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
