Query= MSMg01no500_b05.b1 MSMg01no500_b05.b1 CHROMAT_FILE:
MSMg01no500_b05.b1 PHD_FILE: MSMg01no500_b05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:39 2005
(206 letters)
>mm_chr2_69563395_69564000
Length = 606
Score = 369 bits (191), Expect = e-107
Identities = 200/203 (98%), Gaps = 2/203 (0%)
Strand = Plus / Minus
Query: 5 gaattccatacatta-tcattattgtatttaaattgcttctaacaccccctctcctacat 63
||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gaattccatacatgagt-attattgtatttaaattgcttctaacaccccctctcctacat 348
Query: 64 cctcccaaaagtccccttaaattcatgacctctgttttatacacacacacattcaaactc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 cctcccaaaagtccccttaaattcatgacctctgttttatacacacacacattcaaactc 288
Query: 124 ctgggcccttttaaagttggtcacatgtgcatgtgttttaggtctatttgggattggata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ctgggcccttttaaagttggtcacatgtgcatgtgttttaggtctatttgggattggata 228
Query: 184 acctatcagggtctcatctctga 206
|||||||||||||||||||||||
Sbjct: 227 acctatcagggtctcatctctga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 206
Length of database: 606
Length adjustment: 8
Effective length of query: 198
Effective length of database: 598
Effective search space: 118404
Effective search space used: 118404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no500_b05.g1 MSMg01no500_b05.g1 CHROMAT_FILE:
MSMg01no500_b05.g1 PHD_FILE: MSMg01no500_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:26:39 2005
(312 letters)
>mm_chr2_69381416_69382126
Length = 711
Score = 540 bits (279), Expect = e-158
Identities = 285/287 (99%), Gaps = 1/287 (0%)
Strand = Plus / Plus
Query: 1 tcattctgtttgaggcagtggaatgacagacaccaacacaaatgttatccagaataaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattctgtttgaggcagtggaatgacagacaccaacacaaatgttatccagaataaata 260
Query: 61 gagcaatgtacatgtgtacacacacaaaaaaaaattacaaaaaaagagcagggtaagata 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 261 gagcaatgtacatgtgtacacacacaaaaaaaa-ttacaaaaaaagagcagggtaagata 319
Query: 121 acaataactccttaataagataagatttgaacaagaactactaagtgtaacaaaatgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acaataactccttaataagataagatttgaacaagaactactaagtgtaacaaaatgttg 379
Query: 181 ttgactgggggtattgacaagagtgttccaggaagttggattggctacaagcaagtaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgactgggggtattgacaagagtgttccaggaagttggattggctacaagcaagtaggg 439
Query: 241 ctatacagtgatgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtg 287
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 ctatacagtgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 711
Length adjustment: 9
Effective length of query: 303
Effective length of database: 702
Effective search space: 212706
Effective search space used: 212706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
