XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGCGCTATC
CCATCTGGTCCTGGGCTTTTTTGGGGTGGGAGACTATTAATGTCTGTTTC
TATTTCTTTAAGGGATTTGGAACAATATGGATCATTATTCTGATTCTTAT
TTAACTTTGGTACCTAGTATCTGTCTAGAAAATTGTCCATTTCATCTAGG
TTTTCCAGTTTTGTTGAGTATAAGCTTTTGTAGTAGAATCTGATGATTTG
GGGGGGGGGATTTCCTCAGATTTTGTTGTTATGTCTCCCTTTTCATTTCT
AATTTTGCTAATTAGGATGCTGTCCCTATGCCCTCTAGTTTTTCTGGCTA
AGGGCTTATGTATTTTGTTGATTTTCTCAAAGAATCAGCTCCTGGTTTGG
TTGATTCTTTGTATAGTTCTTTTTGTTTACACTTGGTTGATTTCAGCCCT
GAGTTTGATTATTTCCTGCTGTCTACTCCTCTTGGGTGAATTTGCTTCCT
TTTGTTCTAGAGCTTTGAGGTGTGCTGTCAAGCTGCTAGTGTATGCTCTC
TCCAGTTTCTTTTTGGAGGTACTCAGAGCTATGACTTTTCCTTTTAGGAC
TGCTTTCACTGTGTCCCATAATTTTGGGTATGTTGTGGCATCATTTTCAT
TAAACTCTAAAAAGNCTTTCTTTCTTTCTTTCTTTTTTCCTTTTTTCTTT
CC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXCCAGAAAATTCTTTTCCAATCTAATGAATGTTTTAAGATTTT
AAATGAAGGGATACATGTCTGAGATAATGTAAGACATTTCTGAAATAGGG
GGAATAGCGAGGAACATTTGCTCTGCCAGCTGAGAACGTGATAGAATTCA
ATGTATTTGAATCAATGTGGCATTGGCTACAGATCAGTGGTTAGGAATTC
AGAATCTGAAAATAAACCCTAGTATGTATGAGAATTTAACATATAGCTAA
GGTGATATTTCACTTGGAAAAATGGTGGGTTTTATAACATATGGTGTTAA
TCCAGCAGGCTATTCATCAGGAAGTAGAATCAATTACATCACTGCATTAT
ATCATACAGACAGAATTTGAATGGGTCGAAAATGAAATGTGGTAACACAA
TAGACACTGGCTGCAGCCTGTCTAAAAGACAGAGTTTACAAACTGAGGTG
ATGGGGGAACAGGATTCAACACGTTTAAAAAAGTGATTAGACGAGCAATC
TCTTTGGGAAAGAACTTGTGTGTAGAGCACAGAAGGCTGGTGCCTGCAAT
ATACAAGGAATTCCCACAAACTGATAAGCAGATTATCCAGAGAGAAAAAG
GGCAAAAGATAGAAAATGAGAACTTGGCAGAATAATCAAAAAGATCAACA
TCCTTATAG

Query= MSMg01no500_n19.g1 MSMg01no500_n19.g1 CHROMAT_FILE:
MSMg01no500_n19.g1 PHD_FILE: MSMg01no500_n19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:27:35 2005
         (519 letters)



>mm_chr2_80071742_80072660
          Length = 919

 Score =  973 bits (503), Expect = 0.0
 Identities = 515/519 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ccagaaaattcttttccaatctaatgaatgttttaagattttaaatgaagggatacatgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ccagaaaattcttttccaatctaatgaatgttttaagattttaaatgaagggatacatgt 660

                                                                       
Query: 61  ctgagataatgtaagacatttctgaaatagggggaatagcgaggaacatttgctctgcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 ctgagataatgtaagacatttctgaaatagggggaatagcgaggaacatttgctctgcca 600

                                                                       
Query: 121 gctgagaacgtgatagaattcaatgtatttgaatcaatgtggcattggctacagatcagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 gctgagaacgtgatagaattcaatgtatttgaatcaatgtggcattggctacagatcagt 540

                                                                       
Query: 181 ggttaggaattcagaatctgaaaataaaccctagtatgtatgagaatttaacatatagct 240
           ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 539 ggttaagaattcagaatctgaaaataaaacctagtatgtatgaggatttaacatatagct 480

                                                                       
Query: 241 aaggtgatatttcacttggaaaaatggtgggttttataacatatggtgttaatccagcag 300
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 479 aaggtgatatttcacttggaaaaatggtgggttttgtaacatatggtgttaatccagcag 420

                                                                       
Query: 301 gctattcatcaggaagtagaatcaattacatcactgcattatatcatacagacagaattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gctattcatcaggaagtagaatcaattacatcactgcattatatcatacagacagaattt 360

                                                                       
Query: 361 gaatgggtcgaaaatgaaatgtggtaacacaatagacactggctgcagcctgtctaaaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gaatgggtcgaaaatgaaatgtggtaacacaatagacactggctgcagcctgtctaaaag 300

                                                                       
Query: 421 acagagtttacaaactgaggtgatgggggaacaggattcaacacgtttaaaaaagtgatt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 acagagtttacaaactgaggtgatgggggaacaggattcaacacgtttaaaaaagtgatt 240

                                                  
Query: 481 agacgagcaatctctttgggaaagaacttgtgtgtagag 519
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 239 agacgagcaatctctttgggaaagaacttgtgtgtagag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space:   462681
Effective search space used:   462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)