XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCTTA
GGTTTCCAAAATGGGCTACTAGAAACAGAATTAACCAGCAAATGCGCTCC
CTTCTTTTGGGAATTGAGAACACCAGATTGAGACAGCACACTCCTTGTCT
GTTCCCCACAGCTTCTTCGCACTGAACCACTTCTCTGTAGCATCGTGCCC
TCTGAGCAAGAATTCTACAAATCGAAAATGAAAGTAGCTGCATTTCAATG
ATTGCAATTCACTGACATCATAGGAGTTTGACAAAAAACACATCCTGCAC
AGCTCCCTGTACTTTCTGTAGAAATGGACCTATGGGAGGTCACAAACCTA
TAGGAGGTCACAGACCTATGGGAGGTTACAGACCAATGGGAGGCTACAGA
CCTATGGGAGGTCACAGACCTATGGGAGGCTACAGACCTATGGGAGGCTA
CAGACCTATGGGAGGTCACAGACCTATGGGAGGCTACAGACCTATGGGAG
GTTACAGACCTATGGGAGGTCACAGACCTATGGGAGGCTACAGATCTATG
GGAGGTTACAGACCTATGGGAGGTCACAGACCTATGGGAGGTCACAGTTC
TATGGGAGGTCACAGTTCTATGGGAGGTCACAGACCTATGGGAGGTCACA
GATCTATGGGAGGTCACAGTTCTATGGGAGGTCACAGACCTGTGGGAGGT
CACAGACCTATGGGAGGTTACAGATCTA

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCATGCAGACTTTAGGCCTTAAGTTTG
CAATCATGCCAGAGTCTCTAAAGTCTGGTGGCTCTAAAAGGCAGACGATT
GTGCTAGTTTTAGCTCTTTCACAGATTTCCACTTTCCTTTCCTCCCTCTA
GACTCATGCATGCCTCTGTCTAAAAGGAAGGGATTGCTCTAGAAGGTTCT
TAAGATAGTTGAACAGGAAAGCCCCCCCACACCAAGCTGAGAGCTATGAG
TGAATGACTTAGATAACCAACAGTATGTATGGAGGGATGAGTGGTGTAGA
GTCCTGGCCCTGGCACTCCTAGTCCTGAGTTCCTTCTCCCTATCTGTCAG
GACAGCGGACAACAGTGGGTCTGATGGTCCCCAAGCCAGTGGTTTGCAGT
CCCAGCACTAAGCAGTCACAGACTTTTTGGATATCATGGTCCTTCAGGAC
AAGGGTGGGCGAACGGCAATGTCCATCGTCGTTTATTCCTTCATTTCACT
GAAGGAGCAGTAGCTGGGTCCTAGGCCCCTCACGGTGCAGTCTGTGCTGT
CGCTGTCACACTTGCCACAGTGACATTCAGTGGCTACTGGATATGTGTAG
AGGGAGTCTGAGTGGCGGGCACAGCCAGGCAATCTTACGGTCTCGTATAC
CAGCTCCTTGAAGGTACATACTTTCTGGGGTATTGGGCCGAGCTGGGGTC
TTTATACACAGATCCTGAGGAA

Query= MSMg01no501_f21.g1 MSMg01no501_f21.g1 CHROMAT_FILE:
MSMg01no501_f21.g1 PHD_FILE: MSMg01no501_f21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:11 2005
         (548 letters)



>mm_chr2_106896780_106897726
          Length = 947

 Score = 1006 bits (520), Expect = 0.0
 Identities = 541/548 (98%), Gaps = 1/548 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catgcagactttaggccttaagtttgcaatcatgccagagtctctaaagtctggtggctc 60
           |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 201 catgcagactttaggccttaagtttgcaatcatgccagagtctccaaagtctgatggctc 260

                                                                       
Query: 61  taaaaggcagacgattgtgctagttttagctctttcacagatttccactttcctttcctc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaaggcagacgattgtgctagttttagctctttcacagatttccactttcctttcctc 320

                                                                       
Query: 121 cctctagactcatgcatgcctctgtctaaaaggaagggattgctctagaaggttcttaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctctagactcatgcatgcctctgtctaaaaggaagggattgctctagaaggttcttaag 380

                                                                       
Query: 181 atagttgaacaggaaagcccccccacaccaagctgagagctatgagtgaatgacttagat 240
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct: 381 atagttgaacaggaaagcccccc-acaccaagctgagagctatgagtgaatgagttagat 439

                                                                       
Query: 241 aaccaacagtatgtatggagggatgagtggtgtagagtcctggccctggcactcctagtc 300
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaccaacagtatggatggagggatgagtggtgtagagtcctggccctggcactcctagtc 499

                                                                       
Query: 301 ctgagttccttctccctatctgtcaggacagcggacaacagtgggtctgatggtccccaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ctgagttccttctccctatctgtcaggacagcggacaacagtgggtctgatggtccccaa 559

                                                                       
Query: 361 gccagtggtttgcagtcccagcactaagcagtcacagactttttggatatcatggtcctt 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 560 gccagtggtttgcagtcccagcactaagaagtcacagactttttggatatcatggtcctt 619

                                                                       
Query: 421 caggacaagggtgggcgaacggcaatgtccatcgtcgtttattccttcatttcactgaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 caggacaagggtgggcgaacggcaatgtccatcgtcgtttattccttcatttcactgaag 679

                                                                       
Query: 481 gagcagtagctgggtcctaggcccctcacggtgcagtctgtgctgtcgctgtcacacttg 540
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 680 gagcagtagctgggtcctaggcccctcacggtgcagtcagtgctgtcgctgtcacacttg 739

                   
Query: 541 ccacagtg 548
           ||||||||
Sbjct: 740 ccacagtg 747


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 947
Length adjustment: 10
Effective length of query: 538
Effective length of database: 937
Effective search space:   504106
Effective search space used:   504106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)