XXXXXXXXXXXXXXXXXXXXXXXXXTCAGTAAATGGCGCGGAATTCCTCG
TGAATGCAAACACATCTCCTTTACTATTGTTCAGTCTTGTTTCCATTTTT
AAAATTACCTTAGTGACAGAATTCTCTCCCCCTTCAAATCTTGTCTTGTT
ATGAAAATGTTATCATACTGTTTCAGGGACTAATGGCTACAAGAAAGTCA
CCCCAGAGCATGACATGACTTCAATTCACTGAAGTGTCTGCTCTTCTTGG
GGAGTCAGCTTATCCTGCCCTGTCCTCTTTATCCAGCTAGTGAAGGTCTT
CTGGGACATGTGTCTTTGTGTATAAACTACTTAGCTAACTAGGTACTGTA
GATAACTTCCCATATGCTGATTTAAACCTCCCAGGTGTATTATATTTTCA
AATGCATTTGATATTCATATGAGTGTCCTTTATTGAATTGGGTTATTGCC
CATGGTGTGCCTGTGTGCCATAGACAAATATCAATTGCTTAATCTGGTTA
ATGACCATACATCTATATAGTTGCCAAACCTAAAATTTGTGCTTGATTAA
CATTGGTTAACATTGATTGCCCACCTAACTGAATCTAGACCCATCCAGAA
GACAAACCTCTCTGTATTTCTCTGATGGAGATTCTAGATTAAGTTAACCG
AGTTAAGAAAATCCATTAAAATGGGGGTATCACTATTCTATGGTCTTTGG
GTTTCN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXCAGATCATATGAAGCTCAAGAAGATAGAAGATCAAAGTGTG
GGTCCTTCAGTCCTTCTTAGAAAGGGGAACAAACTACTCATGGGAACAAA
TACAGAGACAAACTGCAGAGCAGAGATTGAAGGAGAGGCCATCCAGAGAC
TGTCCCACCTGGGGATCCATCCCATATATAGTCACCAAAGCCAGGCACTA
TTGTGGATGCCAAGAAGTGCCTGCTGAAAGGAGCCTGATATAGGTGACTC
CTGAGAGGCTCTTTTAGAGCCTGACAAATACAGAGGTGAATGTTCTCAGT
CAACCATTGGACTGAGCACGAGGTCCCAATGGAGGAGTTAGAGAAAGGAC
TGAAGTAACTGAAGGGGTTTGCAAACCCATAAGAAGAACAACAATATCAA
CCAACCAGACCCCCTAGAGCTCTCAGGGATTAAACGACCAACCAAAAGTA
CACATGGAGGGACCCATGGCTACAGATATAGCAGAGGATTGCCTTGTCAG
GCACCAATGGGAGGAGAGGCCCTTGGTCCTATGAAGGCTTGATGCCCCAN
GGGAATGTGANGACAGGGAGGCAGGANTGGGGAGGTGGATGGTTNAACAT
CCTCTTATAACCAGTGGGAGGGGGATGGGATAAGAGAGATTTTTGTTTGA
GATT

Query= MSMg01no501_o19.b1 MSMg01no501_o19.b1 CHROMAT_FILE:
MSMg01no501_o19.b1 PHD_FILE: MSMg01no501_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:50 2005
         (533 letters)



>mm_chr2_123082830_123083762
          Length = 933

 Score = 1009 bits (522), Expect = 0.0
 Identities = 531/534 (99%), Gaps = 2/534 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcctttactattgttcagtcttgtttccatttttaaaattaccttagtgacagaattc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 tctcctttactattgttcagtcttgtttccatttttaaaattaccttagtgacagaattc 674

                                                                       
Query: 61  tctcccccttcaaatcttgtcttgttatgaaaatgttatcatactgtttcagggactaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 tctcccccttcaaatcttgtcttgttatgaaaatgttatcatactgtttcagggactaat 614

                                                                       
Query: 121 ggctacaagaaagtcaccccagagcatgacatgacttcaattcactgaagtgtctgctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggctacaagaaagtcaccccagagcatgacatgacttcaattcactgaagtgtctgctct 554

                                                                       
Query: 181 tcttggggagtcagcttatcctgccctgtcctctttatccagctagtgaaggtcttctgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tcttggggagtcagcttatcctgccctgtcctctttatccagctagtgaaggtcttctgg 494

                                                                       
Query: 241 gacatgtgtctttgtgtataaactacttagctaactaggtactgtagataacttcccata 300
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gacatgtgtctttgtggataaactacttagctaactaggtactgtagataacttcccata 434

                                                                       
Query: 301 tgctgatttaaacctcccaggtgtattatattttcaaatgcatttgatattcatatgagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tgctgatttaaacctcccaggtgtattatattttcaaatgcatttgatattcatatgagt 374

                                                                       
Query: 361 gtcctttattgaattgggttattgcccatggtgtgcctgtgtgccatagacaaatatcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtcctttattgaattgggttattgcccatggtgtgcctgtgtgccatagacaaatatcaa 314

                                                                       
Query: 421 ttgcttaatctggttaatgaccatacatctatatagttgccaaacctaaaatttgtgctt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttgcttaatctggttaatgaccatacatctatatagttgccaaacctaaaatttgtgctt 254

                                                                 
Query: 481 gattaacattggttaacattgattgcccacct-aactgaatctagacccatcca 533
           ||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 253 gattaacattggttaacattgattg-ccacctaaactgaatctagacccatcca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)