ACTCACTATTTCGAGAGGATCCGCGGAATTCACTAGATTTATCCTCAGTA
TACGGTATTCATTCTGCCTTTCCTTGAAAGTAAATGTCCCAGTGACTGTC
TCTATCATGCTGTAATCCTTTGTGCAGACTAGTGCCTGGTACATTACCTG
TTCTTACATACATTTGGATCTTTTCAGCTTTTTCCTAACATTCAAATGTA
GGCAACTCCATTCCAGTATCCATTATGTATGCAATGACACAATTTTACAA
AATCAAATTACATTTCACAAAGACCAAACCTTTCTCAAGCCTCAGAGCAA
GGTTAGTAATACAACGGGCATTTATTTAAGATTAATTAAAGCTATGCACT
TAACCTGCTGCTCTACTCTGTACCCAGTACATCCCACACTCAGCCTGTTT
TAAGTTTAACCTGCCTTTAAGACAGATTATAACCAACCTTACTCTGTATT
GGAATACCCATAAGATCAACTTTATAAGCTAACCTATGTTATATCTTTAA
TCTTAAATCATGAACCCTTCTGGGTCTCTAACACAGAATAATGTATGTTT
GTGTTGTGGAAATCATTTGCTGAAAACAGCCAACATGTTGGAAGCAAGTT
TATATGACAAATATCTATCATAAGTGTTAAAAACAACGTTGAGTATATCT
CCCCAACTTCAAGTTAGGTTGCTATTCTAGGTCAGTAAGAAGCTTTCGCC
TTTATAAAACTCTGGTTAGGATTGCTGAAAAGAGTCTTTCATCCTTTTCT
ATGCG

TCTCTTCTTTCCTTTTGGGGTTTTTTCCTTTCTTTATCTTCGATGATAXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCCCAGAAGCAGATTTTTATCTACAAACTAGTT
TGAGAGTTATTGGCTAGCAAAACATCAATTGGAGGTTGGAAAACAGAAAA
CTGAAAAGGAAGATCTTAGTAAACATGTTTTATATTCCATTCAAAGTTGC
CCCCCGCTTGGGGGGGCAAGTGGAAACCTTTTAAATTTTTCTGGAAGGAC
CCTCTCTGAAAAAAAAATACAATTGGGTTGGGGCCCCCCCCCTGGGTAAA
AGGGTTTTTTGGGAAGGGGCCAAAAAAGGGTCCCCCCCCCCCTTAAAAAT
GTTTTTTCAAGGGGTTTCTTCTTAATAAAAAAAGGNCCCTTTTGGGTGTT
TTTTTTTCTTTTACCCAACGCGGGGGGGGGGGCCTCTCCTTCTCCTTGTG
GGGGGAAAGAGAAAAAAAAAATACCTTTTTTTTTTTTTTGTGGGGGCCAT
ATTCAATTTGGCTCCCCCCTCCTTCCTATTTTTTCTTTTATACGACCTGG
TTGTTTGCTCTTTTTTCTCCTTCTCAGTTTAATTATAATTTCTTCTCTTT
TACATTTCCGGGTGGCGGGCCTTGTCCTTTT

Query= MSMg01no502_f20.b1 MSMg01no502_f20.b1 CHROMAT_FILE:
MSMg01no502_f20.b1 PHD_FILE: MSMg01no502_f20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:29:23 2005
         (594 letters)



>mm_chr2_137921653_137922646
          Length = 994

 Score = 1102 bits (570), Expect = 0.0
 Identities = 588/594 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctcagtatacggtattcattctgcctttccttgaaagtaaatgtcccagtgactgtctc 60
           ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctcactatagggtattcattctgcctttccttgaaagtaaatgtcccagtgactgtctc 260

                                                                       
Query: 61  tatcatgctgtaatcctttgtgcagactagtgcctggtacattacctgttcttacataca 120
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcatgctgtaatcctttgtgcagactagtgcctggtacattacctgttcttacataca 320

                                                                       
Query: 121 tttggatcttttcagctttttcctaacattcaaatgtaggcaactccattccagtatcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttggatcttttcagctttttcctaacattcaaatgtaggcaactccattccagtatcca 380

                                                                       
Query: 181 ttatgtatgcaatgacacaattttacaaaatcaaattacatttcacaaagaccaaacctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ttatgtatgcaatgacacaattttacaaaatcaaattacatttcacaaagaccaaacttt 440

                                                                       
Query: 241 tctcaagcctcagagcaaggttagtaatacaacgggcatttatttaagattaattaaagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctcaagcctcagagcaaggttagtaatacaacgggcatttatttaagattaattaaagc 500

                                                                       
Query: 301 tatgcacttaacctgctgctctactctgtacccagtacatcccacactcagcctgtttta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatgcacttaacctgctgctctactctgtacccagtacatcccacactcagcctgtttta 560

                                                                       
Query: 361 agtttaacctgcctttaagacagattataaccaaccttactctgtattggaatacccata 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtttaacctgcctttaagacacattataaccaaccttactctgtattggaatacccata 620

                                                                       
Query: 421 agatcaactttataagctaacctatgttatatctttaatcttaaatcatgaacccttctg 480
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 agatcaactttataagctaacctatgttatatctttaatcttaaatcatgtacccttctg 680

                                                                       
Query: 481 ggtctctaacacagaataatgtatgtttgtgttgtggaaatcatttgctgaaaacagcca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggtctctaacacagaataatgtatgtttgtgttgtggaaatcatttgctgaaaacagcca 740

                                                                 
Query: 541 acatgttggaagcaagtttatatgacaaatatctatcataagtgttaaaaacaa 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acatgttggaagcaagtttatatgacaaatatctatcataagtgttaaaaacaa 794


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space:   574656
Effective search space used:   574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)